Pairwise Alignments

Query, 354 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  121 bits (304), Expect = 3e-32
 Identities = 101/337 (29%), Positives = 157/337 (46%), Gaps = 41/337 (12%)

Query: 26  RWAVMVLVAVGALVVPFVAGPYWLGSILLPCLILSLAAIGLNILTGYAGQLSLGSGAFMA 85
           R+ +  L+ + A+V P  A  Y L  ++L  LI  L  +GLNI+ G AG L LG  AF A
Sbjct: 106 RYIIPALIVI-AIVFPIFANKYLLTVVILG-LIYVLLGLGLNIVVGLAGLLDLGYVAFYA 163

Query: 86  VGAYAAVNLVIRLPWLPFPVSFVLAGMVAGAVGLAFGLLSLRIRGFYVAVATLAAQFFIE 145
           +GAY    L  +   L F     LA + A   G   G   LR+ G Y+A+ TL     I 
Sbjct: 164 IGAYGLA-LGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIR 222

Query: 146 WICTHIPWLVLNT-PSGVVS-TPTLF-----------------LFGFGFSSVPSR---YL 183
            +  +  WL     P+G+ + +PT F                  FGF +++       Y 
Sbjct: 223 LVLNN--WLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYA 280

Query: 184 VAFVTVVALAVVAKNLIRSSAGRALMAVRDHETAAELTGVDTTRAKLTAFAVSGFYCGVA 243
           V F+ V+A+  +   L R   GRA  A+R+ E A    G++    KL+AF +     G+A
Sbjct: 281 VLFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLA 340

Query: 244 GALWAFLYLGNVEIEAFSLHRSFQILFMVIIGGLGSILGSFLGAAFIVLLPVAIANAATL 303
           G  +A  Y G V   +F+   S  IL +V++GG+GS +G  + A  + + P  + +    
Sbjct: 341 GVFFA-TYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRS---- 395

Query: 304 FGEALKPDVLANLELMIFGALIVAFLIIEPSGLARLA 340
                     +   +++FG L+V  +I  P GL R++
Sbjct: 396 ---------FSEYRVLLFGVLMVLMMIWRPRGLIRIS 423