Pairwise Alignments

Query, 354 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 8e-36
 Identities = 115/331 (34%), Positives = 157/331 (47%), Gaps = 33/331 (9%)

Query: 16  EQAIFPVALDRWAVMVLVAVGALVVPFVAGPYWLGSILLPC--LILSLAAIGLNILTGYA 73
           E+   PVA  R   ++ + V +LV    A P  L S  L    LI ++AA+  N+L GY 
Sbjct: 3   EKNPLPVAKGRAPALLSLVVASLV----ALPLLLPSATLATEILIFAMAALACNLLLGYT 58

Query: 74  GQLSLGSGAFMAVGAYAAVNLVIRLPWLPFPVSFVLAGMVAGA-VGLAFGLLSLRIRGFY 132
           G LS G G F  VGAY A  L+I L W  F    +L   V GA + L  G L++R  G Y
Sbjct: 59  GLLSFGQGIFFGVGAYGAALLMIHLQWGMFAA--LLGAAVFGAFLALLVGALAIRRTGIY 116

Query: 133 VAVATLAAQFFIEWIC-THIPWLVLNTPSGVVSTPTLFLFGFGFSSVPS-RYLVAFVTVV 190
             + TLA      ++  T   W   +     V  P + + G     +   R+   FV V+
Sbjct: 117 FVMLTLAFSQMAYFLAYTLSGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVL 176

Query: 191 ALAVVAKNL--IRSSAGRALMAVRDHETAAELTGVDTTRAKLTAFAVSGFYCGVAGALWA 248
            L + A  L  IRS  G  L+A+R++ET A   G DT   K+  F +SG   G+AGAL+A
Sbjct: 177 FLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYA 236

Query: 249 FLYLGNVEIEAFSLHRSFQILFMVIIGGLGSILGSFLGAAFIVLLPVAIANAATLFGEAL 308
            L L    +    L  S  IL M I+GG GS+ GS LGA  IVLL               
Sbjct: 237 ML-LHFAPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLL--------------- 280

Query: 309 KPDVLANL---ELMIFGALIVAFLIIEPSGL 336
             DVL+ L    LM+ G +++  ++    GL
Sbjct: 281 -GDVLSELWPRWLMLLGVILILVVVFMRGGL 310