Pairwise Alignments

Query, 390 a.a., Acyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 1e-62
 Identities = 136/368 (36%), Positives = 198/368 (53%), Gaps = 9/368 (2%)

Query: 18  LRDLAAKFAADKLTPGYKAREHTGTFGKDLVREMGSLGLIAPELPEEFGGSGAGSIYSGV 77
           + D    FA ++L P  +  +    F K+ + EM  LGL    +PE++GGS  G +   +
Sbjct: 10  IADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAM 69

Query: 78  IIEEIARGDFNFGYVNVLASLNGQI----LANFANPEIKRHWLPKLTAGEILLAIALTEP 133
            +EEIA GD   G  + + S++  +    +  F N + K  +L  L  G +L A ALTEP
Sbjct: 70  ALEEIAAGD---GACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFALTEP 126

Query: 134 RGGSDAANLGLRMERDGNHYVINGEKTSISAADQAAAAVVFARTGRPEDKAHGVSAIFVP 193
           + GSDA++L  R   +G+HYV+NG K  I++   A   +VFA T  PE    G+SA  VP
Sbjct: 127 QAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTD-PEAGKRGISAFIVP 185

Query: 194 MDTPGISTTRFTD-LGQHAIGRGSIFFDNVRVPADHLLGAENKGFVQVMQGFDFSRSLIG 252
            D+PG    R  D LGQHA     I FDNV+VP  + LGAE +G+   +   +  R  I 
Sbjct: 186 TDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIGIA 245

Query: 253 LQCLGTARQSLAEAWAYIGERRAFGKPLAAFQGITHQLADFDTRVEGARLLSYNALWLKD 312
            Q +G AR +   A  Y  ER++FGKPL   Q +  +LAD  T++  AR +  +A  L+D
Sbjct: 246 SQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAALRD 305

Query: 313 NGLPHVAEAAMAKWWPPLLAYEAIHACLLIHGHAAYSTELPFEQRLRDVLGLQIGDGTAH 372
            G P + EA+MAK +   +A +     L   G   Y ++ P E+  RDV   QI +GT+ 
Sbjct: 306 AGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSD 365

Query: 373 IMKNIIAR 380
           I + +IAR
Sbjct: 366 IQRMVIAR 373