Pairwise Alignments

Query, 400 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 99/399 (24%), Positives = 156/399 (39%), Gaps = 26/399 (6%)

Query: 11  LSGIALGLGPAMADTRIKIGILSDMSGPYSDLAGPGSVAAARLAVEDFKG------KDKG 64
           L  + LG   A AD  +    L  MSG ++   G  +   +RLA+ +         K K 
Sbjct: 16  LGSLPLGAHRAFADQPLTFYGLKSMSGAFASY-GKYADMGSRLAIAEHPQLLGHPLKYKV 74

Query: 65  IEVEIISGNHQNKADIGSVIARSWIDQEGVDVIGDVTGSPVALAVSQIVKDKDKIQLNAG 124
           I+ E  +G    K        +  I Q+G       T S  ALAVS+ +     + +   
Sbjct: 75  IDTEGNAGKAVRKV-------QEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPV 127

Query: 125 AATADLTGSKCTPNTIHWTYDTWANANGTGSAMVRQ--GGNSWFFIAVDQASGHAMERDT 182
            A  ++TG  C  +T  W+  T+     T   M RQ      W+ I      G A+  + 
Sbjct: 128 GAD-EITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNA 186

Query: 183 IAVVKAAGGQVLGSVKHPLGTSDFSSYLVRAQSSGAKVVGLASGGEDMINAIKQASEFGI 242
             V    G + +G+  H L   +FS YL  A ++   V+ L + G    NA++QA  FGI
Sbjct: 187 RKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQAVNFGI 246

Query: 243 VQGGQSIAGLFTFITDIHALGLKLAQGLVLTEAFYWDRDDASRAFAKRFAALHKGKMPTQ 302
               + +      +     LG  + +G+ L   ++   D               G  P  
Sbjct: 247 KDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKAYGINPNY 306

Query: 303 VHAGVYSSIMHYLKAVEAAGTKDTNTVLAKMRAMPIDDPLFGKGEVRI---DGRAVHHMF 359
             A  Y      L+A+  AG+ D   V A ++ M    P    GE  I   D + +   +
Sbjct: 307 PLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGP---TGEELIRPGDHQVLKDYY 363

Query: 360 LFRVKTPAQSKGEWDVYETLATIPAAQAFRPLNEGGCPL 398
           L R K   Q + E D+ E    I + ++F  ++  GC L
Sbjct: 364 LLRGKPQGQMRDEDDLAE---VISSGRSFVEVDHTGCAL 399