Pairwise Alignments

Query, 280 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  143 bits (360), Expect = 4e-39
 Identities = 86/248 (34%), Positives = 135/248 (54%), Gaps = 10/248 (4%)

Query: 34  LTTLTAASLFALWWLAAHYAWVNPL----FLPSPKAVWDAFVRTATVGYQGSLLHEHLIA 89
           L +L A  LF  W +AA+      L    ++P+PKAV DA  +  T     S L  HL +
Sbjct: 12  LASLLACLLF--WQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLT----SSTLLAHLGS 65

Query: 90  SLYRVLAGYALACLVGIPLGIVMGLSRDVKAVFDPVIEFYRPLPPLALYTLIVMWLGIGD 149
           SL RV AGYA A LVG+ LG+++G S+  +    P +E  RP+P +A   L ++     +
Sbjct: 66  SLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSE 125

Query: 150 ASKVAILFLAALPPLTISSMHAAASVDPRYVKAAKSLGADSRQLFRHVFLPACMPGICTG 209
            S V I F  AL P+ ++++H   +VDPR V +A+SLGA    + R V LP  +P I TG
Sbjct: 126 LSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTG 185

Query: 210 MRISLGFTYTVLVAAEIVAATAGLGWMIWDASKFLLGDIVIMGLFVLAFTGMALDFLIRL 269
           + I +G ++  LV AE+++   G+G+  W++        +++G+ ++   GM    L++ 
Sbjct: 186 LAIGMGTSWFCLVTAEMISGQFGIGYYTWESYTLQNYPDIVVGMLLIGVLGMGSSALVKR 245

Query: 270 AERALTPW 277
                TPW
Sbjct: 246 LGALATPW 253