Pairwise Alignments

Query, 1027 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score =  932 bits (2408), Expect = 0.0
 Identities = 494/1010 (48%), Positives = 687/1010 (68%), Gaps = 14/1010 (1%)

Query: 3    SFTDIFIRRPVLAIVVSLMILVLGLRAMSSMPILQYPRTQNAIVTVSTTYPGADPDVVAG 62
            +FTD FI+RPVLA VVSL+IL+LG +A + + I QYP+ +NA++TV+T YPGA+ + + G
Sbjct: 2    AFTDTFIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQG 61

Query: 63   FITTPLENAIAQANGIDYMTSTSTTGTSTITANLRLNYDTGKALTEINTKVNSVLNQLPS 122
            +IT PL+ ++A A GIDYMTS S    S I+   R+  D+ +  TE+  K N V N+LP 
Sbjct: 62   YITQPLQQSLASAEGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLPQ 121

Query: 123  GTQQPVLTVKVGQTIDAMYIGFRSDAIAGNQITDYLIRVVQPKLQAVQGVQTAELLGSKT 182
             ++ PVL+ +       MY+ F S  ++  QITDYL RV+QPKL  + G+  AE+LG++ 
Sbjct: 122  DSEDPVLSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQV 181

Query: 183  FAMRAWLDPIRLAAYGVTASEVSTALTRNDYIASLGNTKGQMVQVNLTASTSLHNVEEFR 242
            FAMR WLDP++LA +G++A++V+ A+ R +++++ G  KG+ V  ++ AST L + E F 
Sbjct: 182  FAMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVVTSVNASTELKSAEAFA 241

Query: 243  NLIVKEANGAIVRLKDVANVTLGADDYDSATMFDGRESVYIGIQIAPTANLLDVIKGVRA 302
             L +K +  + V L DVA V +GA++YD+ + FDG  SVYIGI+  P AN LDVIK VR 
Sbjct: 242  ALPLKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRR 301

Query: 303  VLPDIESQLPTGLSMGVIYDSSAFVNSSIEEVIHTLVEALAIVTLVVFAFLGSWRSVLIP 362
            ++P++ESQLP+ L++ + YD++ F+ +SI+EVI TL EA+ IV +VVF FLG+ RSVLIP
Sbjct: 302  IMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIP 361

Query: 363  VIAIPLSLIGTFLMMLAFGFSINLLTLLALVLAIGLVVDDAIIVVESVNHHMEEGMSALQ 422
            V+ IPLS+IG    M   G+S+NLLTLLA+VLAIGLVVDDAI+VVE+++ HMEEG S   
Sbjct: 362  VVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPFD 421

Query: 423  AAFASARQLANPIIAMTVVLIAVYVPIGFQGGLTGALFTEFAFTLVGAVTISAVVALTLT 482
            AA   AR++A P+++MT+ L AVY PIGF  GLTGALF EFA TL GAV IS +VALTL+
Sbjct: 422  AALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLS 481

Query: 483  PMMSAYMLKPVDHAGGDLESRMVLAVDRVMGAVTAAYSRSLTGALNYMPVTAVFAGLVLC 542
            PMM A +L+   +  G     +   +D++   +   Y R L   L+  PV  VFA ++LC
Sbjct: 482  PMMCALLLRREQNPSG-----LAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAVIILC 536

Query: 543  SVYWLYGTAQSELAPEEDQGIILAQSISAPNATLQQKLLYNRQTYETFAKHPETETVFQV 602
             +  L    Q+ELAP EDQG+I   S S   A L     Y  Q    F   PE  + FQ+
Sbjct: 537  LIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFPEYYSSFQI 596

Query: 603  ---ESTGTSIAGWVLKPWDERKATTKSLQPMIQQELNAIAGQKIVAFQTSPLPGS-NGLP 658
                   T I G++LKPW+ER+ T   L P++Q +L  I+G +I  F    LPG+  GLP
Sbjct: 597  NGFNGVQTGIGGFLLKPWNERERTQMELLPLVQAKLEEISGLQIFGFNLPSLPGTGEGLP 656

Query: 659  MQIVIGTSDGFDKLNEVAAKFMQEALDTGLFIFLNNDLKIDQPQASIVIDREKTSLLGLS 718
             Q VI T+  +  L +VA +    A ++G F FL+ DL  D+P+  + IDR K + +G+S
Sbjct: 657  FQFVINTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVS 716

Query: 719  MSDVGGALSSLLGGGYVNYFSLDGRSYKVIPQVKQEARLNTDQVLDYYMRMSDGTMIPLS 778
            M  +GG L++LLG   +N F+L+GRSYKVI QV++  R N   + +YY++   G ++PLS
Sbjct: 717  MDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKNDQGQLLPLS 776

Query: 779  TVARIETKTVPESLNHFQQVNAATIAGVVAPGVTTGDAITVLKDLAKRTLPTGYTLDFGG 838
            T+  +  +  P  LN FQQ+NAA I GV  P V+ G+A+  ++D+A+   P G+  D+ G
Sbjct: 777  TLITLTDRARPRQLNQFQQLNAAIIQGV--PMVSLGEALKTVQDIAREEAPEGFAFDYAG 834

Query: 839  ASRQYVQESGGFVTTFAFALIVIFLSLAALFNSFRDPVVILLSVPMSLAGALLFISVGIG 898
            A+RQYVQE      TF  AL +IFL LAA F SFRDP+VIL++VP+S+ GALL + +G+ 
Sbjct: 835  AARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGV- 893

Query: 899  GASINIYTQVGLTTLMGLISKHGILMLEVANELQLD-GKSKREAIIEAATLRLRPILMTT 957
             +S+NIYTQVGL TL+GLISKHGIL++E AN+L+ + G S REAI EAA +RLRP+LMTT
Sbjct: 894  -SSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTT 952

Query: 958  AAMVLGVVPLIFASGAGAASRFNLGLVIATGLAIGTLFTLYVVPTAYVLM 1007
            AAMV G+VPLI ASGAGA SRF++G+VIATG++IGTLFTL+V+P  Y L+
Sbjct: 953  AAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYTLL 1002



 Score = 67.4 bits (163), Expect = 5e-15
 Identities = 64/318 (20%), Positives = 136/318 (42%), Gaps = 16/318 (5%)

Query: 707  IDREKTSLLGLSMSDVGGALSSLLGGGYVNYFSLDG--RSYKVIPQVKQEARLNTDQVLD 764
            +D  K +  GLS +DV  A+         N+ S  G  +   V+  V     L + +   
Sbjct: 188  LDPVKLAGFGLSATDVTNAVRRY------NFLSAAGEVKGEYVVTSVNASTELKSAEAFA 241

Query: 765  YY-MRMSDGTMIPLSTVARIETKTVP-ESLNHFQQVNAATIAGVVAPGVTTGDAITVLKD 822
               ++ S  + + L  VAR+E      ++++ F    +  I     P     D I  ++ 
Sbjct: 242  ALPLKTSGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRR 301

Query: 823  LA---KRTLPTGYTLDFGGASRQYVQES-GGFVTTFAFALIVIFLSLAALFNSFRDPVVI 878
            +    +  LP+   +     + +++Q S    + T   A++++ + +     + R  ++ 
Sbjct: 302  IMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIP 361

Query: 879  LLSVPMSLAGALLFISVGIGGASINIYTQVGLTTLMGLISKHGILMLEVANELQLDGKSK 938
            ++++P+S+ G L F+ +   G S+N+ T + +   +GL+    I+++E  +    +GKS 
Sbjct: 362  VVTIPLSMIGVLFFMQMM--GYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSP 419

Query: 939  REAIIEAATLRLRPILMTTAAMVLGVVPLIFASGAGAASRFNLGLVIATGLAIGTLFTLY 998
             +A +E A     P++  T  +     P+ F +G   A      L +A  + I  +  L 
Sbjct: 420  FDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALT 479

Query: 999  VVPTAYVLMGQTHRREEG 1016
            + P    L+ +  +   G
Sbjct: 480  LSPMMCALLLRREQNPSG 497