Pairwise Alignments

Query, 511 a.a., Antibiotic efflux pump outer membrane protein ArpC from Xanthobacter sp. DMC5

Subject, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  451 bits (1160), Expect = e-131
 Identities = 235/493 (47%), Positives = 336/493 (68%), Gaps = 6/493 (1%)

Query: 6   ALSRLAPRLKGGVVAASLLLMNGCMVGPDFEAPDAPRVS---GYLPEGTPRPTTSADVHG 62
           A  RLA     G V  + LL++ C VGPDF+ P+ P  +    Y P   P  T  A+   
Sbjct: 20  AARRLARWPVQGAVLGTALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPA 79

Query: 63  GRSQAFLRGRDLPGEWWRVFRNKQIDAFVAEAIRNHPDIAAAQAALRAARENALAGEGSL 122
           G++Q  + GRD+P +WW VFR++ +D  +  ++   P +A+AQAALR A     A  G+L
Sbjct: 80  GQAQELVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNL 139

Query: 123 FPQVSAN-GSATRQVTSLASQGESGNTNPYNLYNASVSVSYVLDVWGGTRRNVEALEAQA 181
           +PQVSA  G    + + +++Q   G      LYNASV+VSY LDV+GGTRR +E  +A  
Sbjct: 140 WPQVSAQLGVQRERASEISTQVPGGQL--LTLYNASVNVSYNLDVFGGTRRQIEGAQAAV 197

Query: 182 DYQRFQLEATYLSLTANVVTAAITDASLRAQIEATNDIIKSEQEQLKLVQRQFELGAVAQ 241
           D QR+Q+EA YL+LT+N+VT AI +ASLRAQ++AT ++++++ EQL ++++QF+ GA+ +
Sbjct: 198 DTQRYQVEAVYLTLTSNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPK 257

Query: 242 SDVLSQQSNLAQTQATLPPLQKQLAQQRNQLMAYLGRLPSQDRGEHVTLASLTLPRDLPV 301
           S VL Q++ +AQTQATLPP++K LAQ R+QL  + GRLPS+       LASL+LP+ LP+
Sbjct: 258 SIVLQQRTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLPQALPL 317

Query: 302 SVPSALVRQRPDIGAAEASLHKATATVGVNVANMLPQVQLTGSYGRAGLTPDSLFSPGTA 361
           S+PS L RQRPD+ A+EA LH+A+A VGV  AN+ PQ+QL+ SYG   L    LF+  T 
Sbjct: 318 SLPSELARQRPDVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTT 377

Query: 362 AWSIAGSVAQTVFDGGTLYHDKESAVASNEQALAQYKSTVITAFRDVADSLRAIEADAST 421
            W+I   + Q +F+GG L   + +AVA+ + A AQY++TV+ AF++VAD+LRA+E DA  
Sbjct: 378 LWNIGAGLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIA 437

Query: 422 LKAQLAYEKAAQESVKISRTQYLAGAVTYPSVLTAEQNFQQAVVARVKAQAARFTDTAAL 481
           L+ Q A E  A++S+ +S  Q+ AGAV+Y ++LTA+Q + Q   A V+AQAAR+ DTAAL
Sbjct: 438 LQNQAAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAAL 497

Query: 482 FQALGGGWWNRVD 494
           FQALGGGWWNR +
Sbjct: 498 FQALGGGWWNRAE 510