Pairwise Alignments

Query, 511 a.a., Antibiotic efflux pump outer membrane protein ArpC from Xanthobacter sp. DMC5

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  186 bits (472), Expect = 2e-51
 Identities = 140/487 (28%), Positives = 239/487 (49%), Gaps = 26/487 (5%)

Query: 19  VAASLLLMNGCMVGPDFEAPDAPRVSGYLPEGTP-RPTTSADVHGGRSQAFLRGRDLPGE 77
           +A +  ++ GC + PD++ P+AP V+   P+G    PT SADV                 
Sbjct: 8   LAVTAFILGGCSLIPDYQTPEAP-VAAQWPQGPAYSPTQSADVAAAEQG----------- 55

Query: 78  WWRVFRNKQIDAFVAEAIRNHPDIAAAQAALRAARENALAGEGSLFPQVSANGSATRQ-- 135
           W + F +  +   +  ++ N+ D+  A   L A R         LFP VSA GS +RQ  
Sbjct: 56  WRQFFHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRV 115

Query: 136 VTSLASQGESGNTNPYNLYNASVSVS-YVLDVWGGTRRNVE-ALEAQADYQRFQLEATYL 193
             +++  GESG T+ Y+   A++ VS Y LD++G  R   E ALE     ++ +  +T +
Sbjct: 116 PANMSQTGESGITSQYS---ATLGVSAYELDLFGRVRSLTEQALETYLSSEQAR-RSTQI 171

Query: 194 SLTANVVTAAITDASLRAQIEATNDIIKSEQEQLKLVQRQFELGAVAQSDVLSQQSNLAQ 253
           +L A+V  A  T  + +A  + T + +K+ +E   L +R  E+G  +  DV   ++ +  
Sbjct: 172 ALVASVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEG 231

Query: 254 TQATLPPLQKQLAQQRNQLMAYLGRLPSQDRGEHVTLASLTLPRDLPVSVPSALVRQRPD 313
            +      Q+ +AQ  N L   LG     D  + + L +  L  ++P  +PS ++++RPD
Sbjct: 232 ARVKYSQYQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQLA-EVPAGLPSDILQRRPD 290

Query: 314 IGAAEASLHKATATVGVNVANMLPQVQLTGSYGRAGLTPDS--LFSPGTAAWSIAGSVAQ 371
           I  AE  L  A A +G   A   P + LT + G   L+PD   LFS G   W     +  
Sbjct: 291 IQEAEHLLKAANANIGAARAAFFPSISLTANAG--SLSPDMGHLFSGGQGTWLFQPQINL 348

Query: 372 TVFDGGTLYHDKESAVASNEQALAQYKSTVITAFRDVADSLRAIEADASTLKAQLAYEKA 431
            +F+ G+L    + +    +  +A+Y+ T+ TAF++V+D L A +     L+AQ    +A
Sbjct: 349 PIFNAGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQA 408

Query: 432 AQESVKISRTQYLAGAVTYPSVLTAEQNFQQAVVARVKAQAARFTDTAALFQALGGGWWN 491
            Q+  +++  +Y  G  +  + L A++N   A  A +  + ++ T    L++ALGGGW+ 
Sbjct: 409 NQDYYRLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYE 468

Query: 492 RVDQTAQ 498
           +  Q  Q
Sbjct: 469 QTGQANQ 475