Pairwise Alignments

Query, 511 a.a., Antibiotic efflux pump outer membrane protein ArpC from Xanthobacter sp. DMC5

Subject, 518 a.a., efflux transporter outer membrane subunit from Erwinia tracheiphila SCR3

 Score =  201 bits (512), Expect = 4e-56
 Identities = 141/497 (28%), Positives = 220/497 (44%), Gaps = 32/497 (6%)

Query: 13  RLKGGVVAASLLLMNGCMVGPDFEAPDAPRVSGYLPEGTPRPTTSADVHGGRSQAFLRGR 72
           R +  V+  + L M+ C VGPD+ AP  P   G          + A     R QA     
Sbjct: 9   RSRISVLLVATLAMSACSVGPDYHAP-TPATPGAF-------NSMASDRASRPQAAA--- 57

Query: 73  DLPGEWWRVFRNKQIDAFVAEAIRNHPDIAAAQAALRAARENALAGEGSLFPQVSANGSA 132
            +   WW+ F + Q+D+ +  AI  +  +  A   +  +R+      G+  P ++   SA
Sbjct: 58  -INPAWWKSFNDPQLDSLIERAIAGNLSLQQAVLRIACSRQQLNQARGAWLPSINGKISA 116

Query: 133 TRQVTSLASQGES-------GNTNPY------------NLYNASVSVSYVLDVWGGTRRN 173
            RQ   L    ES        +TNP              LY  S   S+ LD+WG  RR 
Sbjct: 117 QRQQMGLKGILESKGVYQQVNHTNPQLSSSLDDLTKSVGLYQGSFDASWELDLWGKVRRQ 176

Query: 174 VEALEAQADYQRFQLEATYLSLTANVVTAAITDASLRAQIEATNDIIKSEQEQLKLVQRQ 233
           VEA +AQ            +SL A V    +     +A  +   + I+  Q+ L L + Q
Sbjct: 177 VEAADAQQQVSLESRNDALVSLEAEVARTWLQLRGAQAIAQTLQNQIEMAQQTLTLTESQ 236

Query: 234 FELGAVAQSDVLSQQSNLAQTQATLPPLQKQLAQQRNQLMAYLGRLPSQDRGEHVTLASL 293
            + G     DV   ++ L+  +A  P  + Q+ Q  N L   +G+ P     E      +
Sbjct: 237 QKNGLAPALDVEKARAQLSSLRAQQPQYEAQIHQAMNGLAVLIGQPPGALDNELAAARPM 296

Query: 294 -TLPRDLPVSVPSALVRQRPDIGAAEASLHKATATVGVNVANMLPQVQLTGSYGRAGLTP 352
             LP  +PV +PS L R+RPD+  AEA LH+ATA +GV+VA + P + L+G +G      
Sbjct: 297 PALPNIVPVGLPSTLARRRPDVRQAEARLHEATANIGVSVAQLFPDISLSGQFGMRNTDI 356

Query: 353 DSLFSPGTAAWSIAGSVAQTVFDGGTLYHDKESAVASNEQALAQYKSTVITAFRDVADSL 412
             L +  +  +S+  SV+  +F GG L    + A A    A   Y+ TV+TA +DV ++L
Sbjct: 357 SYLDNWSSHFYSVGPSVSVPIFQGGRLVAGVKMARAEQASAALDYRQTVLTALQDVENAL 416

Query: 413 RAIEADASTLKAQLAYEKAAQESVKISRTQYLAGAVTYPSVLTAEQNFQQAVVARVKAQA 472
            +   D   ++       A Q +  ++   Y  G  ++   L A++   QA    + A+ 
Sbjct: 417 ISYRTDQQQVEGLDQIVNAFQNAFNLANDSYAKGLSSFIDALDAQRQLSQAQQQAISARV 476

Query: 473 ARFTDTAALFQALGGGW 489
               D  AL++ALGGGW
Sbjct: 477 QSSLDLVALYKALGGGW 493