Pairwise Alignments

Query, 262 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 259 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  152 bits (385), Expect = 5e-42
 Identities = 88/230 (38%), Positives = 129/230 (56%), Gaps = 2/230 (0%)

Query: 21  VVLFLMGPIIIAGIVAFSSGDRLEFPIPGFSLRWFVVALQTPQYIEGLTVSVIIGLGNAL 80
           VV FL+GP +I    +FS+GD L FP  GFSL+W         + E   +S+ + +G   
Sbjct: 14  VVGFLIGPFLIIVAASFSAGDTLAFPPQGFSLKWIAKVFTVESFRESFAMSMFLAIGGTF 73

Query: 81  LATIAGTGAAIALHRYRFRGRSAVQALVMLPIAMPAIVLGLGLLFTLAVYDMRPGILAAT 140
            A I G  A+ A+ RY+      V+ +V  PI +P I++GL LL    V       LA  
Sbjct: 74  TALILGIPASYAMSRYKLPFAETVRTIVSAPIIVPGIIVGLALLRYFVVPFGIGITLALF 133

Query: 141 LGHAVLGVPYVVAMVSAALANHDGSLERASMNLGVGPVGTFFRVTLPMIRGGVIAGAVSA 200
           L H  L +PY V +VSA+L N    +E A++ LG   +G FFRV LP IRGG+++  +  
Sbjct: 134 LAHTALILPYAVRVVSASLNNLRSDIEEAAVLLGSSRLGAFFRVVLPNIRGGILSAFILG 193

Query: 201 FLISFDNFSLSLFITRGD--TLPLRLMQQLLAYADPSVAAISTLLVFASL 248
           F+ SF+   +SLF++     TLP+ ++  +    DPSVAA+S+LL F S+
Sbjct: 194 FVTSFNQVPVSLFLSGPGVRTLPIDMLGYMEIVFDPSVAALSSLLAFLSI 243