Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 6e-15
 Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 2/144 (1%)

Query: 10  LYLSEKGQLARVIQRIVRNSSTAEDLVHDSFVTLIGKEPDASIRDQVAYLTRIAENLALD 69
           ++ +++ ++  ++ R V   +TA DLV + F+    + P+  +     YL R A NLA+D
Sbjct: 24  VFQAQRARMEALVSRRVGCRATASDLVQELFLRF-WRRPEVKVEALDTYLLRCAGNLAID 82

Query: 70  HRRREARMSSLEEAAI-FDLADASPSPETVVADRDALVQTLKILAAMPERTQRAFQMHRL 128
           H R E+    + EAA+    A  + +PE  V     L +    L A+PERT++ F ++R+
Sbjct: 83  HLRSESSRERVAEAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRI 142

Query: 129 GEMTLAQIAVELSISTAHAGRLVM 152
                ++IA  + +S +   + +M
Sbjct: 143 HGCKYSEIAKAMQLSQSAVEKHMM 166