Pairwise Alignments

Query, 168 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 1/152 (0%)

Query: 11  YLSEKGQLARVIQRIVRNSSTAEDLVHDSFVTLIGKEPDASIRDQVAYLTRIAENLALDH 70
           +L    +L     R +R+   AEDL HD+FV ++ + P   +    AYL + A N+A+D 
Sbjct: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVL-ETPREQVEQPRAYLHQAARNIAVDG 65

Query: 71  RRREARMSSLEEAAIFDLADASPSPETVVADRDALVQTLKILAAMPERTQRAFQMHRLGE 130
            RRE R  +LE  A  + A  S  PE  V   +      + LA +P   ++ F   +L  
Sbjct: 66  FRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEG 125

Query: 131 MTLAQIAVELSISTAHAGRLVMDGYRRIRDGL 162
           +T A+IA  + +S     + ++   R +R+ L
Sbjct: 126 LTQAEIAERMGLSKNMVEKYMIRTLRHLREHL 157