Pairwise Alignments

Query, 474 a.a., Tyrosine recombinase XerC from Xanthobacter sp. DMC5

Subject, 399 a.a., Integrase from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 3e-36
 Identities = 118/407 (28%), Positives = 185/407 (45%), Gaps = 37/407 (9%)

Query: 3   KLTKRTVDAAEAGAKDYVIWDDELPGFGLRVFTSGKRSYVLQYRS-AGRSRRFTIGLHGV 61
           KLTK  VDAA+  A+   + D  +PGF  ++  SG++ ++LQYR+ AG  R+  +G +G 
Sbjct: 5   KLTKSAVDAAQPQAQAVELRDTLVPGFLCKITPSGRKVFMLQYRTNAGERRKPALGQYGE 64

Query: 62  WTPERARQEAKAQLGRIAQGDDPAEERLLDRKALTVKELCDHYLTDLQGGLILGKGGRPK 121
            T E+AR  A+  L ++ +G DPA ++   RKA TVKELC  ++ D              
Sbjct: 65  LTVEQARSLAQEWLAQVRRGGDPAADKAQARKAPTVKELCTKFMEDY--------SKLRN 116

Query: 122 KHSTIASDLGRIHRHIVPLLGSRRVRDLTKVDITKAMKDIMAGKTRVTVKTKNLRGKSIV 181
           K ST       I R+IVP++G  +V+D+ + D+   MK       ++T K  +       
Sbjct: 117 KPSTQEGYQSVIDRNIVPMIGRMKVQDVKRPDVAGMMK-------KMTHKPAD------- 162

Query: 182 KGGAGTATRTVGLLGGILTYAVEAGIIE--TNPAHGVRRPKDNVRTRRLSEAEY-RVLGD 238
                 A RT  ++  +   A   G     TNP   V    +   T  +S+ +  ++   
Sbjct: 163 ------ANRTFSVMRRMFNLAEVWGYRPDGTNPCRHVPMFPNGKATHLISDEDMGKLFRH 216

Query: 239 LLKVAAEN-ESYRMSVEIIRQIALTGCRRTEMVTLRWAEADMDSSCLRLIDSKEGSSVRP 297
           L  + AE  ESY + + I  Q    G RR E+VTL+W   D ++  +   DSK G   +P
Sbjct: 217 LEHLEAEGLESYVIPLAIRLQFEFAG-RRGEIVTLQWDWVDFENRRVVWPDSKTGGMSKP 275

Query: 298 IGLPVVEYLEKRRKEAVGDYVFPG---RGGENAFGSFPNHWWKIFAASSLADVTPHILRH 354
           +       L    +     YV P     G     G + N W +   A+  A V  H +RH
Sbjct: 276 MSEEAYRLLSAAPRRDDCPYVLPSPNHPGQHLTTGEYYNGWSRALKAAGAAHVGTHGIRH 335

Query: 355 SFASVANDLGFTEVTIAALVGHAKGSVTSNYIHTLDTALIMAADTIS 401
             A+   + G       AL  H   ++   Y+HT D  +  AA+ ++
Sbjct: 336 RSATDIANSGIPVKVGMALTAHKTVAMFMRYVHTEDDPVRKAAELVA 382