Pairwise Alignments

Query, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  250 bits (639), Expect = 1e-70
 Identities = 156/391 (39%), Positives = 224/391 (57%), Gaps = 22/391 (5%)

Query: 301 EMEQRKRAEEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLELLRKRVAND--PRAVR 358
           E E+  +AE  LRQ QKME +GQL+G +AHDFNNLL  ++G  EL+R+R+          
Sbjct: 296 EQERLAKAEAALRQAQKMEAVGQLSGGIAHDFNNLLGGILGAQELMRQRLDQSRFDALAP 355

Query: 359 LVDGACQGAQRGAALTQRLLAFARRQDLKVEPRSLTDLVSGAVDLIERSIGSRIELRLHL 418
           L++ +   AQR ++L  RLLAF+R+Q L+     +  LV+G  DL+ R+IG  I L    
Sbjct: 356 LLELSSSAAQRASSLVHRLLAFSRQQTLQPCSTQVATLVAGMEDLLRRTIGPAITLSSRF 415

Query: 419 SQDSPPALVDANQIELALLNLVVNARDAMPNGGVVSISVDH----PQAAPGAGLPEGPYV 474
           +    P  +D  Q+E ALLNL +NARDAMP GGV+ I  D+     + A    LP   +V
Sbjct: 416 ASQLWPTFIDPPQLESALLNLCINARDAMPAGGVIEIIGDNLLLDDEQAVALELPASEFV 475

Query: 475 RLTVSDTGYGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEVGAG 534
           RL++ D G GM AE +E+A EPFF+TK  G+GTGLGLSM +G   Q  G LR+ S  G G
Sbjct: 476 RLSIVDNGSGMSAEVVERAVEPFFTTKPMGQGTGLGLSMTYGFVRQSGGQLRVLSVPGEG 535

Query: 535 TRAELWLPATTPLVGEEKRAPIS------VGREMEEL-NVLVVDDDFLVAFSTVEMLRDL 587
           TR EL LP       E+ +APIS      + R  E    +L+V+D   +     E+L +L
Sbjct: 536 TRIELLLPRH----HEQAQAPISKPPRTLLQRSSEAAKRILLVEDQTALRLVIGEVLEEL 591

Query: 588 GHRVVESSSGEDALEIIRNDSTVDIMVTDFSMP-RMNGAQLASAARRLRPDLPILLASGY 646
           G+RV    +G  AL  +++    D++++D  +P  +NG Q+A   R   PDL +LL +GY
Sbjct: 592 GYRVDAFENGPSALTHLQSGERPDLLLSDVGLPGGLNGRQVAERFRERYPDLKVLLITGY 651

Query: 647 AELPSDS----IRDLPRIAKPYQQEQLAAEI 673
            E  + S    ++    + KP++ E LA  +
Sbjct: 652 DESAAFSDGQPLQGTLVLTKPFELEALAERV 682



 Score = 35.8 bits (81), Expect = 7e-06
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 252 ANPRLVGVL-SDVTDRKARQDALTRMNEILEERVAARTAE 290
           A  R V VL  DVT+R+  + AL R+NE LE+RV A  AE
Sbjct: 136 AEKRQVAVLFKDVTERRRAEQALQRLNEELEQRVNAALAE 175