Pairwise Alignments

Query, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 782 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  252 bits (643), Expect = 5e-71
 Identities = 152/387 (39%), Positives = 232/387 (59%), Gaps = 21/387 (5%)

Query: 299 LAEMEQRKRAEEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLELLRKRVANDPRAVR 358
           + ++  +KR EE LR+ QK+E +GQLTG +AHDFNNLL  + GNLELL+K +AND +A R
Sbjct: 389 IRDLTGQKRTEEALRRSQKLEAVGQLTGGIAHDFNNLLGIITGNLELLQKNLANDEKANR 448

Query: 359 LVDGACQGAQRGAALTQRLLAFARRQDLKV--EPRSLTDLVSGAVDLIERSIGSRIELRL 416
            +D A + A+RGA LT+RLLAF+R+    V  +P  + D V+G +D+++RS+   ++++ 
Sbjct: 449 RLDTALKSARRGADLTRRLLAFSRQAPTVVGNDPIDINDAVTGMLDMLQRSLTQIVQVKT 508

Query: 417 HLSQDSPPALVDANQIELALLNLVVNARDAMPNGGVVSIS-----VDHPQAAPGAGLPEG 471
            L       +V+ ++ E ALLNL +NARDAMP+GG ++I      V+   A     L  G
Sbjct: 509 KLDPALWKTVVNRSEFEDALLNLAINARDAMPDGGTLAIETSNIVVEAEHARFDPNLQPG 568

Query: 472 PYVRLTVSDTGYGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQLNGALRLSSEV 531
            Y+ L VSD+G G+  + ++K  EPFF+TKE+GKGTGLGLSMV+G A +  G +R+ SE+
Sbjct: 569 EYIVLMVSDSGTGISKDIVDKIFEPFFTTKERGKGTGLGLSMVYGFARRSGGHVRVYSEL 628

Query: 532 GAGTRAELWLPATTPLVGEEKRAPISVGREMEEL-----NVLVVDDDFLVAFSTVEMLRD 586
           G GT   L+ P +   V +    P  +G E  ++      VLV+DD+  +A    E L D
Sbjct: 629 GVGTAFRLYFPRSHAHVAD----PGQIGTETSDIPRGTETVLVIDDELHLAEIAGEFLSD 684

Query: 587 LGHRVVESSSGEDALEIIRNDSTVDIMVTDFSMP-RMNGAQLASAARRLRPDLPILLASG 645
           LG+  + ++   +A+ +++  S +D++ +D  MP  ++G  LA  A  L     +LL SG
Sbjct: 685 LGYAPIITTDTSEAVRLLKERSDIDLIFSDVVMPGGLDGFGLAKLATDL--GRKVLLTSG 742

Query: 646 YAELPSDSIRD--LPRIAKPYQQEQLA 670
           +         D     I+KPY +  LA
Sbjct: 743 FTGYAHQHQNDGGFSVISKPYSKADLA 769