Pairwise Alignments

Query, 687 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 925 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  228 bits (580), Expect = 1e-63
 Identities = 144/396 (36%), Positives = 216/396 (54%), Gaps = 10/396 (2%)

Query: 286 ARTAELTASHAAVLAEMEQRKRAEEQLRQVQKMETIGQLTGNVAHDFNNLLTAVIGNLEL 345
           A    +TA     L ++   K  E QL + Q+M+ +GQL+G +AHDFNNLL+ ++GNL  
Sbjct: 526 AANGAVTAMFVLAL-DISAEKATETQLMEAQRMKAVGQLSGGLAHDFNNLLSVILGNLAA 584

Query: 346 LRKRVANDPRAVRLVDGACQGAQRGAALTQRLLAFARRQDLKVEPRSLTDLVSGAVDLIE 405
            R R A        ++ A + ++RGA +T RLLAF+R+Q LK +P  ++ LV     L+ 
Sbjct: 585 ARDRYAEIDGLDSYLEPAVRASRRGADITSRLLAFSRQQPLKPQPVDVSALVREVSVLLS 644

Query: 406 RSIGSRIELRLHLSQDSPPALVDANQIELALLNLVVNARDAMPNGGVVSISVDHPQAAPG 465
           RS+ S I + +        A+ DANQ+E AL+NL +NARDAMP+GG + + V   +    
Sbjct: 645 RSLPSSITITIPDEGGECWAIADANQLENALINLALNARDAMPDGGRLEMDVRLRRVTDP 704

Query: 466 AGLPE----GPYVRLTVSDTGYGMDAETLEKATEPFFSTKEQGKGTGLGLSMVHGLAVQL 521
               E      Y+ + VSD G G   E + +A EPFF+TK    G+GLGLSMV+G   Q 
Sbjct: 705 LTFDEQVEPDDYLEVRVSDNGLGFAPEAMTRAFEPFFTTKR--LGSGLGLSMVYGFVKQS 762

Query: 522 NGALRLSSEVGAGTRAELWLPATTPLV--GEEKRAPISVGREMEELNVLVVDDDFLVAFS 579
            G + L S +G G+   + LP   P+   GE + A  S      +L  L+ +DD  V   
Sbjct: 763 KGYITLDSRLGMGSTVTILLPRAAPVAVEGEAEEAAPSPSLWQGQL-ALIAEDDADVRAV 821

Query: 580 TVEMLRDLGHRVVESSSGEDALEIIRNDSTVDIMVTDFSMPRMNGAQLASAARRLRPDLP 639
               L DLG  VVE+ SG++A ++      + ++V+D  MP M+G +LA   R  RP + 
Sbjct: 822 LRGQLVDLGFSVVEAESGDEAADLFGQIEGLSLVVSDIVMPGMSGIELAGRIRAERPSIR 881

Query: 640 ILLASGYAELPSDSIRDLPRIAKPYQQEQLAAEIVK 675
           ++L SG++   S    DL  + KP+ +  LAA + +
Sbjct: 882 VILISGFSFDTSPEADDLVILRKPWDRSDLAAAVAR 917