Pairwise Alignments

Query, 507 a.a., Circadian clock protein kinase KaiC from Xanthobacter sp. DMC5

Subject, 481 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  174 bits (442), Expect = 5e-48
 Identities = 146/485 (30%), Positives = 231/485 (47%), Gaps = 30/485 (6%)

Query: 17  TGIEGLDEVLSGGFTSGHVFLLEGNPGTGKTTIALRFLLEGAAAGERCLYITL-SETEQE 75
           TGI+GLD +L GG  +G  ++++G PG GKT +A +        G R L  TL SE+ + 
Sbjct: 10  TGIDGLDALLKGGLIAGASYIIQGPPGAGKTILANQLACGHVRGGGRVLVATLLSESHER 69

Query: 76  LRNGAAAHGWTIDGNIEVFVLVPAESLLDGDQQQSLLYASDLE---LGEATAAIFQAFER 132
           L        +     ++ F     +  L GD+ Q +     LE   L      + Q   R
Sbjct: 70  L--------FQYLSTLDFF-----DPALVGDKIQFVSAFDTLEQDGLDAVVRLLRQEIAR 116

Query: 133 LRPSRVVLDSLSEIRLLAQSSLRYRRQILALKHYFARHGATVLLLDD-RTTETSDKTAHS 191
            + S +++D +   R+ A+++L  ++ +  L+ + A  G TVLLL   R  E S +  H+
Sbjct: 117 QQASLLIVDGVLNARVRAETALDTKKFVSELQGHAAFAGCTVLLLTSARLDEGSPE--HT 174

Query: 192 VVHGVILL-EELAPNYGTERRRLRVSKYRGQAFRGGFHDFAIRTGGVVVFPRLVAS-EHR 249
           +V GVI L E+L  +      +LR  K RG     G H+  I   G+ V+PRL A   H 
Sbjct: 175 MVDGVIELGEQLVGSRAVRHVQLR--KTRGSGALSGRHECLIDESGMQVYPRLEALFSHP 232

Query: 250 QSLAR---TQLKSDVPELDALLGDGIEQGSSTLILGPAGTGKSIFALQFAVAACRRGEAA 306
             L      ++ S VP  D +LG G+  GS +L++GP+G GK+   L F  A+  +    
Sbjct: 233 SQLGSGTLARISSGVPTFDEMLGGGLATGSVSLLMGPSGIGKTSLGLAFLGASTPQAPGL 292

Query: 307 SFFVFDEELDLLFDRARAMGFDLRALRDAGLLHIEQLDAAEMSPGEFAQRTRNQVDKAQA 366
            F  F E  + L  +A ++G+D  A+   G L +      E    +   R   +V    +
Sbjct: 293 HFG-FYETPERLRSKAASLGYDFAAMEKGGSLQLCWQPTTEGLLDQVGARLLERVAAQGS 351

Query: 367 KVVVIDSLNGYQAAMPEEHSLILHIHELIQYLNRRGANTFLTVAQHGLVG-EMRAPV-DV 424
           K VVIDSL  +     +   L      L   L  R  +  LT     + G E+ AP  D+
Sbjct: 352 KRVVIDSLGAFSRLAIDPTRLNAFFRALAGELRARDVSVMLTWEMRDIFGAEISAPAPDL 411

Query: 425 TYLADTVILLRYFEAMGKLRRAVSIIKKRNGRHEDTIREFRITDRGLSLGKPLEEFQGIL 484
           + + D ++L+R+ E   +LRR +S++K R+  H+  + E  I  +G++L K  E   G+L
Sbjct: 412 SSIVDNLMLMRFVELDSQLRRMLSVLKVRDSHHDPALHELLIVPQGITLRKAFEGACGVL 471

Query: 485 RGVPT 489
            G PT
Sbjct: 472 SGTPT 476



 Score = 45.1 bits (105), Expect = 6e-09
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 2/124 (1%)

Query: 253 ARTQLKSDVPELDALLGDGIEQGSSTLILGPAGTGKSIFALQFAVAACR-RGEAASFFVF 311
           A  +L + +  LDALL  G+  G+S +I GP G GK+I A Q A    R  G      + 
Sbjct: 4   ALKRLVTGIDGLDALLKGGLIAGASYIIQGPPGAGKTILANQLACGHVRGGGRVLVATLL 63

Query: 312 DEELDLLFDRARAMGFDLRALRDAGLLHIEQLDAAEMSPGEFAQR-TRNQVDKAQAKVVV 370
            E  + LF     + F   AL    +  +   D  E    +   R  R ++ + QA +++
Sbjct: 64  SESHERLFQYLSTLDFFDPALVGDKIQFVSAFDTLEQDGLDAVVRLLRQEIARQQASLLI 123

Query: 371 IDSL 374
           +D +
Sbjct: 124 VDGV 127