Pairwise Alignments

Query, 408 a.a., Gluconate 2-dehydrogenase cytochrome c subunit from Xanthobacter sp. DMC5

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score =  268 bits (684), Expect = 8e-76
 Identities = 155/382 (40%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 21   GEPSFEQIERGRYLSVLGDCTACHTVQGKKPFVGGVPIDTPFGRLVGPNITPDRETGIGR 80
            G  S   +ERGR ++  GDC  CHTV G K   GG+ +DTPFG L   NITPD ETGIGR
Sbjct: 799  GSWSAAMLERGRQVAAAGDCAVCHTVSGGKANAGGLAMDTPFGTLYSTNITPDPETGIGR 858

Query: 81   WNEVDFQRVMSEGIGKGGYHLYGAMPFTAYTKVTRADNAAIWAYLRTLKPVQNKVEPNQL 140
            W+   F+R M EGI + G HLY A P+T++  +  AD  A++AYL +  PV+ +   NQ+
Sbjct: 859  WSFAAFERAMREGISRDGRHLYPAFPYTSFRNINDADMQALYAYLMSQTPVRQEAPANQM 918

Query: 141  PFPFNIRMSLIGWNIINFTKGEYVPDATRSAEWNRGAYLVEGLGHCGTCHTPKNITGGDR 200
             FPFN R  + GWN     +GEY PD  RSA+WNRGAYLV+GLGHC  CH+P+N+ G ++
Sbjct: 919  RFPFNQRPLMAGWNARFLQRGEYQPDPQRSAQWNRGAYLVDGLGHCTACHSPRNLMGAEK 978

Query: 201  -NSQFLKGSVVDGWLAPDITADPDQGIGK----WSVAQISEYQKTG-SNVYDVASGPMAE 254
              S +L G +VDGW AP + A     +GK    WS  ++  Y  TG S  + VA+GPM  
Sbjct: 979  GGSSYLAGGMVDGWEAPALNA-----LGKSSTPWSEDELFNYLSTGFSEKHGVAAGPMGP 1033

Query: 255  VVKNSSQFWTDKDLKAVATYLKNLAPDAPPERIALDL-----NDARMLAGRAVYDDRCSA 309
            VV   +      D++A+A YL +L  +  P+ +A +          +  G  V+   C  
Sbjct: 1034 VVSELATL-PKSDVRAIAHYLSSL--EGEPQALAANAAPQVDTHVSLSNGERVFKGACLG 1090

Query: 310  CHV-GNGAGIEHLFPKLAGAPLVSNADATSLIRVVLAGSRAGSTDARPTGPAMPSFGGNL 368
            CH  G G  +  + P +A    V +    +L+RVVL G    +T  R  G  MP F  +L
Sbjct: 1091 CHSDGLGPKLFGVSPSMAVNSNVHSDLPDNLLRVVLHGIPTPAT--RDLG-YMPGFKDSL 1147

Query: 369  SDEDVAQVLTYVRNTWGNAAPS 390
            SD  VA +  Y+R+ +    P+
Sbjct: 1148 SDRQVADLAAYLRHRFAADKPA 1169