Pairwise Alignments

Query, 778 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 860 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  252 bits (644), Expect = 5e-71
 Identities = 164/471 (34%), Positives = 247/471 (52%), Gaps = 20/471 (4%)

Query: 304 RPDGRMIWVQSR--SQVNLEASNQLGRAVA-----EGVAIDITDRKLAEAEAEEARRLAL 356
           RPD   I VQ R    + LE S +L           G A D+T       E  EARR   
Sbjct: 379 RPD---ISVQCRYVDALGLERSTRLSARQMPCGGFRGTATDVT-------EEVEARRRIE 428

Query: 357 HAAEHDPLTGLPNRRGLRHLVADDDL---TSGHSGLLMVMDLRSSKLVNDLFGSSGGDER 413
             ++HD LTGLPNR  L+  +        TS    +++ +DL   K VNDL G + GD  
Sbjct: 429 FLSQHDALTGLPNRTRLQAFLEGKFKAMPTSEQPLVMLSLDLDRFKPVNDLLGHAAGDRV 488

Query: 414 LLEAARRLREATPAEGIVARTGDDEFTIYLDDTALAVPADVFVADLIAAVAQPFRLSGQL 473
           L E + RL +      +VAR G DEF + L D       ++    LI ++ +  R+  Q 
Sbjct: 489 LNEVSSRLADCVRHGDLVARIGGDEFVLILTDAGTQDEVEILCKRLIESIERTIRIDEQE 548

Query: 474 VPMRADAGYVVRDSDLTDWESVVRAASAALEEARGGKEAAVVCFNLKLKVQRGERRAFDL 533
           V + A  G  +  +D  +   ++R A  AL EA+         ++  +  +  ERR  + 
Sbjct: 549 VFVSASIGIAIAPNDAREAAELLRYADIALYEAKAAGRNTWRFYSGDMNARIIERRRLES 608

Query: 534 RLAQAIDNHELAVFWQPICAASNGELLGREALVRWVQPDGSLIMPNSFIPRAEATGLWPT 593
            L   I + EL +++QP    ++G+++G EALVRW  P   LI P++FIP AE +GL   
Sbjct: 609 DLRYGIKHGELRLYFQPRYRIADGQMVGAEALVRWQHPVRGLIAPDTFIPIAEESGLILA 668

Query: 594 LDAYMLRRACVEAARWKNDVWISVNMSPGWLMVGNLVDEVRAALEQTGLPAERLCIEVTE 653
           L  ++L  AC  AA+W   +++SVN+SP     GNLV+  R AL  +G+   R+ +E+TE
Sbjct: 669 LSDWVLETACACAAQWPEHLFVSVNLSPTEFKRGNLVERTRQALAVSGIDPARVELEITE 728

Query: 654 RALVEDHALAAKQIGRLRAMGVSVAIDDFGTGYSSLSYLNRLPISKLKIDKSFVDEIETS 713
             ++ED + A + +  L+ +G+ +A+DDFGTGYSSLSYL   P   LKID+SF+  +E S
Sbjct: 729 SVMLEDASGALEVMHTLKRLGLRIAMDDFGTGYSSLSYLRAFPFDGLKIDRSFLTRLEES 788

Query: 714 TRARDVVENIIDLCGKLSILSVAEGVETDNQWSWLKTHGCTAIQGYIVGKP 764
              + ++  I+ L   L++   AEG+ET    + LK+  C   QGY + +P
Sbjct: 789 DDDKAIIHAIVGLGRALALTVTAEGIETAEHLAMLKSVACEEGQGYFLSRP 839