Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 8e-30
 Identities = 99/318 (31%), Positives = 146/318 (45%), Gaps = 12/318 (3%)

Query: 28  LCAAMLVAGLPAILSGYGLLALRDGLIMGLFAVSYDLIWGKARTLTLGHGAFFGLGAYGF 87
           L  A LVA LP +L    L    + LI  + A++ +L+ G    L+ G G FFG+GAYG 
Sbjct: 20  LVVASLVA-LPLLLPSATLAT--EILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGA 76

Query: 88  AIATVPFGLSVGAGLVLGVAAAGLLAVLVGYFLIYANVRLHFFAVITVALLVILGQLAVS 147
           A+  +     + A L+        LA+LVG   I       +F ++T+A   +   LA +
Sbjct: 77  ALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGI--YFVMLTLAFSQMAYFLAYT 134

Query: 148 WSSVTGGDVGILGVPGLPVLFGA---VDLSADLPSFYLVAAVL-LAVILLLWSGCRGNYG 203
            S  TGGD G+L VP   +       VDL AD   FY+  AVL L +        R  +G
Sbjct: 135 LSGWTGGDNGLLDVPRPNIEIAGHVLVDL-ADPRHFYVFVAVLFLLIFAAALRVIRSPFG 193

Query: 204 RVLAAIGMNEFRAKTFGYDTSFHILMAFVASAVLAGAAGALFATTSGVVAPDLFSPLLST 263
             L AI  NE RA   GYDT    ++ F+ S  + G AGAL+A             ++S 
Sbjct: 194 STLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSE 253

Query: 264 QVILWVAVGGRGTLLGPACAAVVLTRLQQEVSSYSTSFWPLIAGSLFLTLILFAPEGA-P 322
            +++   VGG G+L G    A  +  L  +V S     W ++ G + + +++F   G   
Sbjct: 254 NILIMTIVGGTGSLFGSLLGAGAIV-LLGDVLSELWPRWLMLLGVILILVVVFMRGGLWG 312

Query: 323 GLLRRAKAALWWRGTESE 340
           GL    K  L  R  + +
Sbjct: 313 GLTELGKRLLATRNADDK 330