Pairwise Alignments

Query, 509 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 546 a.a., acyl-CoA synthetase from Agrobacterium fabrum C58

 Score =  211 bits (537), Expect = 5e-59
 Identities = 144/462 (31%), Positives = 219/462 (47%), Gaps = 13/462 (2%)

Query: 50  GVKPGDRVAVQVEKSWPALALYLATIRAGAVYLPLNTAYTLNEVEYFLSDAEPAVFVCRP 109
           GV+ GDR+ VQ   +        A  R GAV++P N   + +EV Y    +     +C  
Sbjct: 69  GVRKGDRILVQSSNNNQMFESMFACFRVGAVWVPTNYRQSPDEVAYLAKASGARGMICAS 128

Query: 110 EIEQDARALAARLGVGAVETLGTDGKGSLTDAAAA--FPDTFEDVARGAEDLGGILYTSG 167
                A+A      +     +GT   G   DA  A       +  A   +D     +TSG
Sbjct: 129 AFPDHAKASHEASTIDFSIAIGTAEFGEDYDAIVARHMGRKVKSQAVDRDDPCWFFFTSG 188

Query: 168 TTGRAKGAMLTHANL-LSNAQTLKDYWRFTA-DDVLLHALPIFHTHGLFVASNIVLLAGA 225
           TTGR K A+LTH  +       L D    T  DD  +   P+ H  G+     +   A  
Sbjct: 189 TTGRPKAAVLTHGQMAFVITNHLCDLMPGTGPDDASIVVAPLSHGAGIHQLVQVAHGAKT 248

Query: 226 SMEFRSKFDPKEAVALMSAGKVTTLMGVPTFYTRLLDQPGLTREATKGMRLFISGSAPLL 285
            +    K D     AL+   ++T    VPT    L++ P + R     +R  I   AP+ 
Sbjct: 249 VLPAAEKLDVPAVWALIEKWRITNAFTVPTILKMLVEDPSVDRFDHSSLRYVIYAGAPMY 308

Query: 286 AETHRAFEERTGHAILERYGMTETCMNTS-------NPYDGARI-AGTVGYPLPGISVRV 337
               +    + G  +++ +G+ E   N +       N  DG     GT G+   G+ V++
Sbjct: 309 RADQKRALAKLGPVLVQYFGLGEVTGNITVLPPSFHNAEDGPETRVGTCGFDRTGMEVQI 368

Query: 338 TDPETGAVLPTGEIGMIEVQGPNVFKGYWRMPEKTAAEFRDGFFITGDLGKIDENGYVHI 397
            + +    +  GE G I V GP VF GY+  PE  A  FR+G+F TGDLG  DENG+++I
Sbjct: 369 QN-DAAEEVGAGETGEICVIGPAVFAGYYDNPEANAKAFRNGWFRTGDLGHRDENGFLYI 427

Query: 398 VGRGKDLVITGGFNVYPKEVEGEIDAIPGVVESAVIGVPHPDFGEGVTAVIVAQKDATLT 457
            GR  D+ I+GG N+YP+E+E +I   P + E+AV+GVP   +GE   AV VA++ A + 
Sbjct: 428 TGRASDMYISGGSNIYPREIEEKILMHPDISETAVLGVPDAVWGEVGVAVCVAREGADIA 487

Query: 458 EEAVHRALENRLAKFKQPKRVFFVSELPRNTMGKVQKNILRE 499
              +   LE ++A++K PK V F   +P++  GK+ K ++RE
Sbjct: 488 AIDLKAYLEGKMARYKLPKSVVFWDAMPKSAYGKITKKMIRE 529