Pairwise Alignments

Query, 450 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  177 bits (448), Expect = 8e-49
 Identities = 118/445 (26%), Positives = 228/445 (51%), Gaps = 28/445 (6%)

Query: 8   LLYGGATLGTMFLGMPIAFALGAVAVLFMVGFMPAASLDTVTQNVYEEMAS----ITLLS 63
           L+  G+ +  + +GMP+A+ALG  A++       A  +D   Q +  ++A      +L++
Sbjct: 4   LILLGSFIALILIGMPVAYALGLSALI------GAWWIDIPFQALMIQVAGGVNKFSLMA 57

Query: 64  IPLFILKGAAIGKSRAGQDLYSALHAWMHKIPGGLGIANVFACALFAAMAGSSPATCSAI 123
           IP F+L GA + +    + L +     +  + GGL + N+ A   F A++GSS A  +++
Sbjct: 58  IPFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASV 117

Query: 124 GSAGIPEMRKRGYSGAFAAGLIAAGGTLGILLPPSITMILYAVAA--EQSLGRLFLAGLG 181
           GS  IPEM +RGY   FA  +  +G    +L PPS   +LY++AA    S+  LF+AG+ 
Sbjct: 118 GSVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVV 177

Query: 182 PGLLLVMLFAGYAMVRFRQEYAAAKKAYAETGARSALLHEENLTLRDRFAALPRVLPFVV 241
           PGLL+        ++        AKK     G    L       L+    AL  ++  V+
Sbjct: 178 PGLLMSACLMVLCLI-------FAKKRNYPKGEVIPLKQ----ALKICADALWGLMAMVI 226

Query: 242 LLTGVMVALYGGYATPSETAGLGGVLALALIALIYGVWTPKDLSPILTSTIRESTMLMMI 301
           +L G++  ++    T +E+A +  + A  +   IY  +   +L  ++  T+R  +++M++
Sbjct: 227 ILGGILSGIF----TATESAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMIL 282

Query: 302 IGMSLLYSYVMSYLHISQAAAQAIVALNLSKWLLLATILVLVVVLGFFLPPVSIILMTAP 361
           I  +  + Y+M+ + I        + L+ +++++L  I  ++++LG  +    +IL+  P
Sbjct: 283 IAFAASFGYIMTLMQIPAKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTP 342

Query: 362 IILPPLKAAGFDLIWFGVVMTIVMEMGLIHPPVGLNIFVIKNIAPDIPLKDVIWGTVPFV 421
           I+LP +   G D + FG++M + + +GLI PPVG  +FV   +   + ++  +   +PF 
Sbjct: 343 ILLPVVLGIGVDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVG-KVSIEKTVKALLPFY 401

Query: 422 LLMLLAVILLCLFPQIATGFPDLVM 446
            ++ L ++ +   P ++   P +V+
Sbjct: 402 GVLFLVLMAVTYIPALSLWLPSVVL 426