Pairwise Alignments

Query, 926 a.a., Protein translocase subunit SecA from Xanthobacter sp. DMC5

Subject, 1127 a.a., Preprotein translocase subunit SecA (ATPase, RNA helicase) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  420 bits (1080), Expect = e-121
 Identities = 267/708 (37%), Positives = 398/708 (56%), Gaps = 133/708 (18%)

Query: 199  MVQRPHFYAIVDEVDSILIDEARTPLIISGPLDDRSDFYNTIDQYIPRLSKEDYEVDEKQ 258
            ++Q+   Y + D  +  ++ EA  PL+ +  +D++S+  +  D  I  ++K++ +     
Sbjct: 397  VLQKTENYYLQD--NKRMMPEADEPLLFT--IDEKSNTVDLTDNGIEVITKKNEDSSFFI 452

Query: 259  RTVSMTE-AGMEKMEQMLTEAGLLKSESLYDIENVSV--VHHVNQALRAHSLFQRDKDYI 315
                 TE A MEK E +  +  L++ E +     V    +H VNQ L+A+ +F++D +YI
Sbjct: 453  LPDIGTEIAEMEKDESIDDKEKLIRKEEIIKDYGVKAQRIHTVNQLLKAYCMFEKDTEYI 512

Query: 316  VRNDEVVIIDEFTGRMMPGRRYSEGLHQALEAKERVQVQPENQTLASITFQNYFRLYEKL 375
            + + +V I+DE TGR+M GRRYS+GLHQA+EAKE V+V+   QT A+IT QNYFR+Y KL
Sbjct: 513  LVDGKVKIVDEQTGRVMEGRRYSDGLHQAIEAKENVKVEDATQTYATITLQNYFRMYHKL 572

Query: 376  AGMTGTAATEAAEFQDIYKLEVVEVPTNVPVSRIDDDDEVYRSAGEKYAAIIELIKECSA 435
            +GMTGTA TEA EF +IYKL+VV +PTN P+ R D DD+VY++  EK+ A+++ I E + 
Sbjct: 573  SGMTGTAETEAGEFWEIYKLDVVVIPTNKPIQRDDRDDKVYKTVREKFNAVVDEINELTE 632

Query: 436  RGQPVLVGTTSIEKSELLAELLKQGGF-HQIDFSDPAAFAHDRSGKAFAVLNARYHEQEA 494
             G+PVLVGTTS+E SE+L+ +L      HQ                   VLNA+ H +EA
Sbjct: 633  AGRPVLVGTTSVEISEVLSRMLTLKKIKHQ-------------------VLNAKQHAKEA 673

Query: 495  YIVSQAGVPGAITIATNMAGRGTDIKLGGAADMRIAAELKDMPEGEQRTAAETRIRAEVE 554
             +V++AG PG +TIATNMAGRGTDIKL               PE ++             
Sbjct: 674  EVVAEAGKPGTVTIATNMAGRGTDIKL--------------TPEAKK------------- 706

Query: 555  ELKQKALGAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGHSKFFLSLDDDLMRIFGSDR 614
                    AGGL ++GTERHESRR+D QLRGR+GRQGD G S+FF+SL+D LMR+FGS+R
Sbjct: 707  --------AGGLAIIGTERHESRRVDRQLRGRAGRQGDVGSSQFFVSLEDSLMRLFGSER 758

Query: 615  LDGMLQRLGLKEGEAIIHPWINKALEKAQQKVEARNYDMRKNVLKYDDVLNDQRKVVFEQ 674
            +  ++ R+GL+EGE I H  I+K++E+AQ+KVE  N+ +RK +L+YDDV+N QR+VV+++
Sbjct: 759  IAKLMDRMGLEEGEVIQHSMISKSIERAQRKVEENNFGVRKRLLEYDDVMNSQREVVYKR 818

Query: 675  R-------------LELMND-----DDVAETVEDMR------------------------ 692
            R             L +M D      +VA++ EDM                         
Sbjct: 819  RKNALMGERLELDILNVMYDVCEGIVEVAKSTEDMESLRMNIYSSLGIDYKFSEDDIKSK 878

Query: 693  ------HALITETVAKFIPEN------AYPEQWDV-DGLDAAIKEVLGIELPVKDWAKEE 739
                    L   +   ++ +N      A P   DV +   A +KE++   +P+ D  K+ 
Sbjct: 879  PAPVLSQELFDASYKNYVAKNQRVTDRALPVLKDVYENRGATVKEIM---VPITDGIKQI 935

Query: 740  GIAGPEVTERVIRRADEWMAAKTAQYGPDIMRYVEKSILLQTLDHLWREHIAMLDHLRQV 799
            G+                + +     G D++R +EK++ L  +D  W+EH+  +D L+Q 
Sbjct: 936  GVVCN-------------LQSTLDNEGRDLIRAIEKNVTLAIIDQNWKEHLRDMDDLKQS 982

Query: 800  VGLRGYAQRDPLNEYKSEAFNLFSALLNRLREVVTAQLMRVEIVAQPP 847
            V    Y Q+DPL  YK EAF +F   + +L E V + L + E+  Q P
Sbjct: 983  VQNAVYEQKDPLLIYKFEAFEMFKRFVGKLNEDVISFLAKAELPKQNP 1030



 Score =  202 bits (513), Expect = 1e-55
 Identities = 146/410 (35%), Positives = 199/410 (48%), Gaps = 115/410 (28%)

Query: 8   KLFGSANDRRVKGYRPRVQAINALEKELEALSDDQLRARTEDFRRQLAEGQVTLDD---- 63
           K+FG+ +DR +K   P V  IN    +L +++D++LR +T + R  +     T DD    
Sbjct: 11  KVFGTKSDRDIKELYPFVGKINTAFDQLSSITDEELRNKTIEIRGVVDSELKTFDDNIAT 70

Query: 64  ----------------------------------------LLVPAFATVREGAKR----- 78
                                                   +L  AFA V+E A+R     
Sbjct: 71  LKAEIEALAPDKVHEKDALFNQIDKVEKDRNEALEVVLEKVLPEAFAVVKETARRFKENG 130

Query: 79  ----------------------------------ALG------MRHFDVQLIGGMVLHES 98
                                             A G      M H+DVQLIGG+ LH+ 
Sbjct: 131 KLVVKANDYDRELSAKKDNVEINGDDAIWHNQWLAAGTEITWDMLHYDVQLIGGIALHKG 190

Query: 99  SIAEMKTGEGKTLVATLPVYLNALAGKGVHVVTVNDYLAKRDAEWMGKLYRFLGLTTGII 158
            I+EM TGEGKTLV+TLP YLNALAG+GVH+VTVNDYLAKRD+EW   L+ F GLT   I
Sbjct: 191 KISEMATGEGKTLVSTLPAYLNALAGRGVHIVTVNDYLAKRDSEWNAPLFEFHGLTVDCI 250

Query: 159 -VHGLDDDERRAAYASDVTYATNNELGFDYLRDNMKYERAHMVQRPHFYAIVDEVDSILI 217
             +  +   RR AY SD+ Y TNNE GFDYLRDNM      +VQ  H +A++DEVDS+LI
Sbjct: 251 DKYQPNSAGRRKAYNSDIVYGTNNEFGFDYLRDNMARNADDLVQGKHHFAMIDEVDSVLI 310

Query: 218 DEARTPLIISGPL--DDRSDFY--------------NTIDQYIPRLSKEDYEVDEKQRTV 261
           D+ARTPLIISGP+   D  +FY                I  Y+    K   E ++K+  +
Sbjct: 311 DDARTPLIISGPVPRGDEHEFYEMKPRVSTLVDEQRKLIQGYLSTAKKLIGEGNQKEGGL 370

Query: 262 SMTEA--GMEKMEQM---LTEAG----LLKSESLYDIENVSVVHHVNQAL 302
           ++  A  GM K + +   L+E G    L K+E+ Y  +N  ++   ++ L
Sbjct: 371 ALFRAYRGMPKYKPLIKYLSEPGIRVVLQKTENYYLQDNKRMMPEADEPL 420