Pairwise Alignments

Query, 426 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Xanthobacter sp. DMC5

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  434 bits (1117), Expect = e-126
 Identities = 208/423 (49%), Positives = 301/423 (71%)

Query: 1   MAITILFGVFSLLLLVGTPVAFCLGLASLATVLYLDLPPVVVFQQLNSGMNAFSMLAIPF 60
           M   IL G F  L+L+G PVA+ LGL++L    ++D+P   +  Q+  G+N FS++AIPF
Sbjct: 1   MDALILLGSFIALILIGMPVAYALGLSALIGAWWIDIPFQALMIQVAGGVNKFSLMAIPF 60

Query: 61  FIFAGDLMMRGGIADRLIGMAASLVGHLRGGLGQVNVVASTLFGGISGSAVADASAIGGI 120
           F+ AG +M  GG++ RL+  A  LVG +RGGL  VN++AST FG ISGS+VAD +++G +
Sbjct: 61  FVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTASVGSV 120

Query: 121 MIPQMARHGYAKDYAVNVTVNSAIIALMIPPSHNMIIYSLSAGGTISIADLFTAGIMPGL 180
           +IP+M R GY +++A  VTV+ ++ AL+ PPSHN ++YSL+AGG++SIA LF AG++PGL
Sbjct: 121 LIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGVVPGL 180

Query: 181 LLAAAMMITAYVVARNRGYPAGTFPGWHAVLRSVVAAIPGIMLIGIIFGGVRSGIFTATE 240
           L++A +M+   + A+ R YP G        L+    A+ G+M + II GG+ SGIFTATE
Sbjct: 181 LMSACLMVLCLIFAKKRNYPKGEVIPLKQALKICADALWGLMAMVIILGGILSGIFTATE 240

Query: 241 SSCIAVIYALLVTTLVYREMHWADFVEATLGAVRTTAMVLLVIGTAASFGWLMAFLQVPK 300
           S+ IAV++A  VT  +YR+  W++  +     VRT ++V+++I  AASFG++M  +Q+P 
Sbjct: 241 SAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMTLMQIPA 300

Query: 301 ATIEMMQAISSNPYVILLLINIILLILGTFMDMAPMIIICTPIFLPLVKAFGIDPVHFGV 360
               +   +S N YVIL+ IN +LL+LGT MDMAP+I+I TPI LP+V   G+DPVHFG+
Sbjct: 301 KITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVDPVHFGM 360

Query: 361 ILILNAGIGLNTPPVGSVLFVGCAVGKITIGEAMKTIWPFFGASIAVLMIVTYVPAVSLW 420
           I+++N GIGL TPPVG+VLFVG AVGK++I + +K + PF+G    VLM VTY+PA+SLW
Sbjct: 361 IMLVNLGIGLITPPVGAVLFVGAAVGKVSIEKTVKALLPFYGVLFLVLMAVTYIPALSLW 420

Query: 421 LPA 423
           LP+
Sbjct: 421 LPS 423