Pairwise Alignments

Query, 357 a.a., Diacetylchitobiose uptake system ATP-binding protein MsiK from Xanthobacter sp. DMC5

Subject, 358 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  372 bits (955), Expect = e-108
 Identities = 194/362 (53%), Positives = 257/362 (70%), Gaps = 18/362 (4%)

Query: 1   MATVDIRGVKKAYGSTQVIHGVDVDIRDGEFVVLVGPSGCGKSTLLRMIAGLENISGGEI 60
           MA+V +R + K+YG+ +++ G+D++I DGEFVV VGPSGCGKST LRM+AGLE+I+GGE+
Sbjct: 1   MASVSLRKLDKSYGALRIVKGIDLEINDGEFVVFVGPSGCGKSTTLRMVAGLESITGGEV 60

Query: 61  LIGNRVINEMPPKERDIAMVFQNYALYPHMTVADNMGFSLKLRKAPKSEIESRVQRAAEI 120
            IG+RV+N++PP+ERDIAMVFQ+YALYPH TV +NMGFSLK+R    S+  + +  AA++
Sbjct: 61  KIGDRVVNQLPPRERDIAMVFQDYALYPHKTVRENMGFSLKVRGVSASQANASIDEAAKM 120

Query: 121 LNLTKLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAQLRVQMRTEIKELH 180
           L +  LLDR P QLSGGQRQRVAMGRAIVR PQVFLFDEPLSNLDA+LR Q+RTEIK LH
Sbjct: 121 LGIEHLLDRRPGQLSGGQRQRVAMGRAIVRRPQVFLFDEPLSNLDAKLRGQVRTEIKRLH 180

Query: 181 QRLKTTTVYVTHDQIEAMTMADKIVVMHDGIVEQIGAPLDLYDRPANQFVAGFIGSPSMN 240
           Q+L TT +YVTHDQ+EAMT+AD+IV++  G +EQ+G P ++Y+RP + FV GF+G+P+MN
Sbjct: 181 QQLGTTIIYVTHDQVEAMTLADRIVILRGGDIEQVGTPDEVYNRPESVFVGGFVGAPAMN 240

Query: 241 FVKGKVRLGANPMLVTDSGVEVPL----PDAQGLSDGQKVVYGLRPEHIRLDPA-GVPAQ 295
           F + +V       L    G  +P+    P  +   +G+ V+ G+RPEH    PA G  +Q
Sbjct: 241 FARARVN---GDRLAFSDGNSLPMAAIRPSRETGLEGRDVIVGIRPEH--FGPAEGFDSQ 295

Query: 296 ----VVVTEPTGSEILVVARLGEGGDAQEITCLFRERLSFSPGEVIRIAPQPGLTHLFDE 351
               V V EP GS+ LV   LG+      +T     +L  +P E +RI   P   HLFD 
Sbjct: 296 LAVSVQVVEPLGSDTLVHFSLGDAA----LTARMPPQLRPTPNEELRIGVDPSKVHLFDA 351

Query: 352 AT 353
            T
Sbjct: 352 TT 353