Pairwise Alignments

Query, 326 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 4e-25
 Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 16/291 (5%)

Query: 24  YETSVRFFAYSGDAYVATDVIFIAPEVSGPLAKVVVGDDAPVAAGAVLAEIERQPFALAV 83
           Y    R+   + DAYV  +V+ I P V+G +  +   D   V AG VL + +     +A+
Sbjct: 42  YSIVGRWHESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVAL 101

Query: 84  AAAEAQVTLAAERIRLAEAAIDESTAMVSAARASLDNARRQQTRSESLSQTGDISAEALD 143
            +AEA++  +  ++R   + +D   A +   +A L  A++   R + L+ +G I+AE L 
Sbjct: 102 QSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELS 161

Query: 144 MVRRDAVVAAADLQKAE-----SLAAVAQTLVTVRRAEQATAAQALAKASYELSRTRIVS 198
             R D  VA A +  A      S A V  T+V+      A AA  L +A  + +RT +V+
Sbjct: 162 HARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDVMAAAAD-LRQAYLDHARTTLVA 220

Query: 199 PVKGRVAPLTVRTGDYATAGKPLAAVVS-DLDWHIVAAVDERHLARLKPGQSVLFT---I 254
           PV G VA  TV+ G     G    AV+  D  W I A   E  L  ++ GQ V  T    
Sbjct: 221 PVTGYVAKRTVQLGQRLQPGTATMAVIPLDQVW-IDANFKETQLREMRIGQPVEITADVY 279

Query: 255 GSDPWRPHWGTVRSISPGIARSAGEDGALPYVPLSTDWIRLPRRFPVLIDM 305
           GS+    + GTV S+  G   +      LP    + +WI++ +R PV I +
Sbjct: 280 GSEV--KYSGTVDSLGAG---TGSAFALLPAQNATGNWIKIVQRVPVRIHL 325