Pairwise Alignments

Query, 326 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 6e-26
 Identities = 93/320 (29%), Positives = 145/320 (45%), Gaps = 49/320 (15%)

Query: 9   VVASILGAVVLAFVVYETSV--RFFAYSGDAYVATDVIFIAPEVSGPLAKVVVGDDAPVA 66
           VV ++L     A +V++  V   F  ++ D ++  DVI IAP+VSG + KV V D+  V 
Sbjct: 11  VVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDNQTVK 70

Query: 67  AGAVLAEIERQPFALAVAAAEAQVTLAAERIRLAEAAIDESTAMVSAARASLDNARRQQT 126
            G VL  I++  F LA+  A+A  TL   +  LA+A+                   R+  
Sbjct: 71  RGDVLFTIDQDRFTLALRQAKA--TLGERQETLAQAS-------------------REAQ 109

Query: 127 RSESLSQTGDISAEALDMVRRDAVVAAADLQKAESLAAVAQTLVTVRRAEQATAAQALAK 186
           R+  L                  +VAA  L++++S  A A++ V       + A  A+  
Sbjct: 110 RNRKLGN----------------LVAAEQLEESQSREARARSAV-------SEAQVAVDT 146

Query: 187 ASYELSRTRIVSPVKGRVAPLTVRTGDYATAGKPLAAVVSDLDWHIVAAVDERHLARLKP 246
           A   L R+ + SPV G +     R  ++ TAG+P+ +VV    +H+    +E  L  +  
Sbjct: 147 AQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFEETKLGGIHI 206

Query: 247 GQSVLFTIGSDPWRPHWGTVRSISPGIARSAGEDGA--LPYVPLSTDWIRLPRRFPVLID 304
           G +V   +  D  R   G V+S + GI       GA  LP V  +  W+RL +R PV I 
Sbjct: 207 GDAVDIRVMGDNTRLR-GHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRLAQRIPVRIA 265

Query: 305 MGDLPARERLYRGADARVLI 324
             ++P   R+  G  A V I
Sbjct: 266 FDEVPQDFRMIAGRTATVSI 285