Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 277 a.a., DNA repair protein from Pseudomonas simiae WCS417

 Score =  103 bits (257), Expect = 4e-27
 Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 9/280 (3%)

Query: 3   PRASWKGFLTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDEETGKPVETED 62
           PRA WKG ++ G +   V L +A S S+ +    L ++S   +  + +++ TGK V  ++
Sbjct: 2   PRAIWKGAISFGLVHIPVSLVSATS-SQGVDFDWLDKRSMDPVGYKRINKTTGKEVTKDN 60

Query: 63  QVRGYEVSKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDEAA 122
            V+G    KG Y+ +  EE  +  P + +TI I AF+  D I    +D PYFLAP D+  
Sbjct: 61  IVKGVAFEKGRYVVLSEEEIRSAHPKSTQTIEIIAFVASDQIPLQNIDTPYFLAP-DKRG 119

Query: 123 AEVFDLLKRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAE--E 180
            +V+ LL+  +   +  AL   +L  +     + P     AL+   L +  EVRS +  E
Sbjct: 120 GKVYALLRETLRKTRKVALANVVLHTKQHLAALMPL--DSALVLVMLRWPAEVRSLDELE 177

Query: 181 AFAEVPDVKITGEMRELATHIIKTKAGKFDPEAYQDRYETALAELVRAKMEGKPLPKAAP 240
             ++V    +     ++A  ++   +  + P+ Y+D ++  +  LV  K +   +     
Sbjct: 178 LGSDVTKPSLAKGELDMAKRLVDDMSADWQPDDYRDSFQEKIMALVAKKAKAGKIEDVET 237

Query: 241 RK---EEKVVDLLAALRASAKASGGDGAGKKASAKAGKAA 277
            K   E K  D++       ++  G    K A+ K+ KA+
Sbjct: 238 SKDSEERKSADVIDLTELLKRSLAGKPTKKPAAKKSTKAS 277