Pairwise Alignments

Query, 300 a.a., Non-homologous end joining protein Ku from Xanthobacter sp. DMC5

Subject, 313 a.a., Ku protein from Variovorax sp. OAS795

 Score =  108 bits (269), Expect = 2e-28
 Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 15/295 (5%)

Query: 11  LTVGALSCAVGLYAAASTSERISLHMLSRKSGHRLRRQYVDE-ETGKPVETEDQVRGYEV 69
           L  G +S  V LY+A   S  +  ++LS K G R+++QYV   +  K V   + V+GYE 
Sbjct: 12  LGFGLVSIPVRLYSATEGSATVHFNLLS-KEGERVKQQYVSATDPQKVVPRAEMVKGYEF 70

Query: 70  SKGEYITIEPEEAAAVLPDNDKTISIDAFLPCDGIDTVYLDRPYFLAPVDEAAAEVFDLL 129
            K  ++  +PEE  A+       I I AF+P D +D +Y D+PY+LAP D+   + ++LL
Sbjct: 71  EKDRFVIFKPEELKALEEGASHLIDIVAFIPADAVDPIYYDKPYYLAP-DKRGGKPYNLL 129

Query: 130 KRGMAAQKVAALGEALLFRRVRKLLIRPSGESGALLASTLSFDYEVRSAEEAFAEVPDVK 189
           K+ M      AL  A    + ++ +++   +   L+   L +  EVRS E+   ++  ++
Sbjct: 130 KKAMLESGRCAL--AKWAWKSKQYVVQVRAKEEGLILQQLLYADEVRSLED--LDIEQLE 185

Query: 190 ITGEMRELATHII-KTKAGKFDPEAYQDRYETALAELVRAKMEGKPLPKAAPRKEE---- 244
            +    +LA  +I +     ++P  ++D  +  +   + AK+ G+ +  AA   E+    
Sbjct: 186 PSASELKLALQLIDQISQESYEPAMFEDEEKKRILAAIDAKIAGEEI-VAAEHPEDAAGG 244

Query: 245 KVVDLLAALRASAKASGGDGAGKKASAKAGKAAAKVPAKKPTARPATARKSTRKV 299
           +V+DL   L+AS   +    +G +    A K +A  PA  P    ++  K   KV
Sbjct: 245 QVIDLAEMLKAS--LARNSTSGPQVRTAAPKRSASPPAVAPLRSVSSKAKRAPKV 297