Pairwise Alignments

Query, 572 a.a., 30S ribosomal protein S1 from Xanthobacter sp. DMC5

Subject, 576 a.a., 30S ribosomal protein S1 from Pseudomonas putida KT2440

 Score =  548 bits (1411), Expect = e-160
 Identities = 272/554 (49%), Positives = 380/554 (68%), Gaps = 4/554 (0%)

Query: 9   EDFAALLDESFGRADTNEGSVVKGIVVAIEKDLAIIDIGLKTEGRVALREFAGPGRENAI 68
           E FA L +ES    +   G+++ GIVV I+ D   +  GLK+EG + L +F     E  I
Sbjct: 21  ESFAELFEESLKTLNLQPGAIITGIVVDIDGDWVTVHAGLKSEGVIPLEQFYNEAGELTI 80

Query: 69  KVGDEVEVYLERVENAMGEAVLSRDKARREESWVKLEKAFTANEKVFGVIFNQVKGGFTV 128
           KVGDEV V L+ VE+  GE  LSR+KA+R E W+ LE AF A E V GVI  +VKGGFTV
Sbjct: 81  KVGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGFTV 140

Query: 129 DLDGAVAFLPRSQVDIRPIRDVGPLMHNQQPFQILKMDRRRGNIVVSRRTVLEETRAEQR 188
           D++G  AFLP S VD+RP+RD   L   +  F+++K+D++R N+VVSRR+VLE   + +R
Sbjct: 141 DVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSAER 200

Query: 189 HELVQNLEEGQAIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLNIGQTVK 248
             L++ L+EGQ + G+VKN+TDYGAFVDLGGIDGLLH+TD+AW+R+ HP+E++N+G  V 
Sbjct: 201 EALLETLQEGQQVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEIVNVGDEVD 260

Query: 249 VKIIKINHETHRISLGMKQLLGDPWEGIEAKYPVEARFKGRVTNITDYGAFVELEPGIEG 308
           V+++K + E +R+SLG+KQ+  DPW  I A+YP   R + RVTN+TDYG F ELE G+EG
Sbjct: 261 VRVLKFDRERNRVSLGLKQMGEDPWVAITARYPEGTRVQARVTNLTDYGCFAELEEGVEG 320

Query: 309 LIHVSEMSWTKKNVHPGKIVSTSQEVEVQVLEVDSAKRRISLGLKQTLQNPWEAFAEKYA 368
           L+HVSEM WT KN+HP K+V    EVEV VL++D  +RRISLG+KQ   NPWE F+ ++ 
Sbjct: 321 LVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQFN 380

Query: 369 PGAVVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWNRPGEQVIDEYRKGDMVKAVVLDV 428
            G  + G +K+ T+FG+F+GLDG +DG+VHLSD+ WN  GE+ +  ++KGD ++ V+L V
Sbjct: 381 KGDKITGTIKSITDFGIFIGLDGGIDGLVHLSDISWNETGEEAVRRFKKGDELETVILSV 440

Query: 429 DVEKERISLGIKQLAGDPFADAGEVK-KGAVVTCEVTDVKDGGIEVKLTGTDLSAFIKRS 487
           D E+ERISLGIKQL  DPF++   V  KGA+V   V +V   G  V L   D+ A +K S
Sbjct: 441 DPERERISLGIKQLEDDPFSNFVAVNDKGAIVKGIVKEVDAKGAIVTL-ADDIEATLKAS 499

Query: 488 ELARDRNDQRPERFSVGDKLDARVTLFDRKARKVQVSIKAMEIAEEREAVAQFGSQDSGA 547
           E++RDR +        G++++A++   DRK+R + +SIK+ + AEEREA+    +    A
Sbjct: 500 EISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDDAEEREAIQSLKNAPEAA 559

Query: 548 SLGDILGAALKQRA 561
           +  D   AAL + A
Sbjct: 560 A--DTTMAALLREA 571