Pairwise Alignments

Query, 572 a.a., 30S ribosomal protein S1 from Xanthobacter sp. DMC5

Subject, 776 a.a., Transcriptional accessory protein from Enterobacter asburiae PDN3

 Score = 62.4 bits (150), Expect = 7e-14
 Identities = 30/78 (38%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 190 ELVQNLEEGQAIDGVVKNITDYGAFVDLG-GIDGLLHVTDIAWRRVNHPTEVLNIGQTVK 248
           E + +L  G  ++G V N+T++GAFVD+G   DGL+H++ +A + V  P  V+  G  VK
Sbjct: 643 ETMNDLLPGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVK 702

Query: 249 VKIIKINHETHRISLGMK 266
           VK+++++ +  RI+L M+
Sbjct: 703 VKVLEVDLQRKRIALTMR 720



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 3/85 (3%)

Query: 369 PGAVVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWNRPGEQVIDEYRKGDMVKAVVLDV 428
           PG V+EG V N T FG F+ +    DG+VH+S L  ++  E      + GD+VK  VL+V
Sbjct: 650 PGMVLEGAVTNVTNFGAFVDIGVHQDGLVHISSLA-DKFVEDPHTVVKAGDIVKVKVLEV 708

Query: 429 DVEKERISLGIK--QLAGDPFADAG 451
           D++++RI+L ++  +  GD  A  G
Sbjct: 709 DLQRKRIALTMRLDEQPGDTNARRG 733



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 26/67 (38%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 287 KGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQEVEVQVLEVDSAKR 346
           +G VTN+T++GAFV++    +GL+H+S ++  K    P  +V     V+V+VLEVD  ++
Sbjct: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLA-DKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713

Query: 347 RISLGLK 353
           RI+L ++
Sbjct: 714 RIALTMR 720