Pairwise Alignments

Query, 174 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 2e-17
 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 15  YMRQWRDLRAHLCRRVGSRDLAEEALQETWLRLAGMGPAPVGVRDCHAFLLRIAGNIAID 74
           +  Q   + A + RRVG R  A + +QE +LR        V   D   +LLR AGN+AID
Sbjct: 25  FQAQRARMEALVSRRVGCRATASDLVQELFLRFWRRPEVKVEALD--TYLLRCAGNLAID 82

Query: 75  LLRRERRHAARQISDEAVLRGIADATPSPEAYALHRDELRVLVHALAELEQRPRAALLLS 134
            LR E   +  ++++ AV    A    +PE       +L+ +   L  L +R R   LL+
Sbjct: 83  HLRSE--SSRERVAEAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLN 140

Query: 135 RCDGLTHAEIGARMKVSDSMVAKYLVQALRHCR 167
           R  G  ++EI   M++S S V K++++AL  C+
Sbjct: 141 RIHGCKYSEIAKAMQLSQSAVEKHMMRALEACK 173