Pairwise Alignments

Query, 174 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 75.1 bits (183), Expect = 5e-19
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 5/154 (3%)

Query: 19  WRDLRAHLCRRVGSRDLAEEALQETWLRLAGMGPAPVGVRDCHAFLLRIAGNIAIDLLRR 78
           +R+L + L  R+GSR  AE+   + +LR+     +   +    AFL R A N+ +D   R
Sbjct: 5   YRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQ-IEHPRAFLYRTALNLVVD---R 60

Query: 79  ERRHAARQISDEAVLRGIADATPSPEAYALHRDE-LRVLVHALAELEQRPRAALLLSRCD 137
            RR   RQ      L   +    S   + L  D+ L ++  AL EL +  R + LL + +
Sbjct: 61  HRRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIE 120

Query: 138 GLTHAEIGARMKVSDSMVAKYLVQALRHCRDRLR 171
           GL+H +I  R+ +S S+V K++V A++HCR R+R
Sbjct: 121 GLSHQQIAERLGISRSLVEKHIVNAMKHCRVRMR 154