Pairwise Alignments

Query, 174 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 73.2 bits (178), Expect = 2e-18
 Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 7/157 (4%)

Query: 15  YMRQWRDLRAHLCRRVGSRDLAEEALQETWLRLAGMGPAPVGVRDCHAFLLRIAGNIAID 74
           ++  + +L     R++ SR  AE+   + ++R+  +      V    A+L + A NIA+D
Sbjct: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRV--LETPREQVEQPRAYLHQAARNIAVD 64

Query: 75  LLRRERRHAARQISDEAVLRGIADATPSPEAYALHRDELRVLVH-ALAELEQRPRAALLL 133
             RRE R  A  +  EA   G A  +  PEAY +H  EL   V  ALAEL    R   + 
Sbjct: 65  GFRREDRRQA--LEREAFEEG-ATGSGDPEAY-VHALELADSVERALAELPLNCRQVFIW 120

Query: 134 SRCDGLTHAEIGARMKVSDSMVAKYLVQALRHCRDRL 170
            + +GLT AEI  RM +S +MV KY+++ LRH R+ L
Sbjct: 121 QKLEGLTQAEIAERMGLSKNMVEKYMIRTLRHLREHL 157