Pairwise Alignments

Query, 863 a.a., Multifunctional non-homologous end joining protein LigD from Xanthobacter sp. DMC5

Subject, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  226 bits (577), Expect = 1e-63
 Identities = 134/331 (40%), Positives = 184/331 (55%), Gaps = 20/331 (6%)

Query: 235 DDTTGTTGTPLTLPRGAKAA----PLPAFIPPALATLATKAPAGTRYLHEIKFDGYRIQA 290
           DD+  T   PL     A+      P+P  + P LA L    P G  + +EIK+DGYR+  
Sbjct: 11  DDSLSTKSQPLRKRDPAQPNLPFDPMPDRVEPCLAMLKPVPPTGPDWAYEIKWDGYRLAV 70

Query: 291 RVENGKVRLLTRTGLDWTDRFGTGILAELNRFPIRTALFDGEIVVESGNGATDFSALQAD 350
            +E   VR++TR G DWT RF T I A   R  I TA+ DGE VV +  G +DF ALQ  
Sbjct: 71  HIEPKGVRIITRGGHDWTHRFPT-IAAAAKRLGIGTAILDGEAVVLNSEGRSDFGALQRS 129

Query: 351 LSEGR-----SDRFVYYVFDLLHLDGHDLTPLPLKDRKDLLEKLVGQDGDKVRYSAHFED 405
           L  GR     S   + + FDLL+ DGHDLT   L  R+ LL  L+      ++ S     
Sbjct: 130 LG-GRGGKRASSESILFAFDLLYFDGHDLTKTELSVRRHLLTDLLDGAVGAIQLSEEVAG 188

Query: 406 DGALVLRHACRLSLEGVVSKLKTAPYHSGRTRDWIKSKCLERQEFVVGGFVPSTTSRTAI 465
           +GA +L +A  L LEG+++K + +PY  GRT DW+K KC++ + F++ G+  S  +R  +
Sbjct: 189 EGAELLENARSLGLEGIIAKHRDSPYRPGRTGDWLKIKCIQSESFMIVGYEQSAAARGGV 248

Query: 466 GSLVLGVFEDGKLRYVGRVGTGFTQRVAADLHKLL--VSEKTDVCPFSGKLTAEEARGVS 523
           GSL+L    D    YVG VGTGF ++ AA L K L  +  +T V P  GK          
Sbjct: 249 GSLLLAARRDHDWVYVGAVGTGFKEKDAAYLKKTLDTLKTRTPVVPLKGK-------NYV 301

Query: 524 FVEPLHVAEVEFGAWTGDGHLRHAAFRGLRE 554
           F +P  +AE+EF  WT DG+LRHA+++GLRE
Sbjct: 302 FAQPTLIAEIEFRGWTDDGNLRHASYKGLRE 332