Pairwise Alignments

Query, 272 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 261 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

 Score =  146 bits (368), Expect = 5e-40
 Identities = 100/269 (37%), Positives = 133/269 (49%), Gaps = 16/269 (5%)

Query: 3   LTVCTWNINSVRIRLDIVRAALERLRPDVLCLQETKCQDDKFPLNAIRDMGFPHIALNGQ 62
           + + TWN+NS+  RL  V   L     DVLCLQE K  DDKFPL  ++  G+   A+ GQ
Sbjct: 1   MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMTDDKFPLEVLKSAGY-EAAVFGQ 59

Query: 63  KGWHGVATFSKRPFAHIEK--GEFCGKGDARHIAVTLDGAHALGKPLTIHNFYVPAGGDV 120
           K ++GVA  S  P   + K  G F     +R IA T+D       PL + N Y    G  
Sbjct: 60  KTYNGVAILSLSPMRDVVKNIGGFT-DDQSRVIAATVDTPSG---PLRVVNGYF-VNGQA 114

Query: 121 PDPELNPKFAHKLAFLDEITSWPPLKPDAGNGDHAIVVGDLNIAPLETDVWSHKQLLTVV 180
           P  +   KF +K+ +LD +  W  L+ +     + +++GD NI P + D +    L   +
Sbjct: 115 PGSD---KFEYKMKWLDALRDW--LRQEMAANPNLVLLGDFNITPEDRDSFDPVGLKETI 169

Query: 181 SHTPVEVERLGALQASGPWVDVMRRFVPPQEKLFTWWSYRSPDYTANDRGRRLDHVWASE 240
            HT  E     AL   G   D  R F  P EK F+WW YR   Y  N RG R+DH+  SE
Sbjct: 170 HHTTEERNHFKALLDLG-LTDSFRMFEQP-EKSFSWWDYRMLGYQKN-RGLRIDHILVSE 226

Query: 241 SLAPSATAMTVLKEARGWEKPSDHVPVAM 269
            L P      V +  R WEKPSDH PV +
Sbjct: 227 PLVPRVKGCVVDRVPRKWEKPSDHAPVVL 255