Pairwise Alignments

Query, 272 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 1e-37
 Identities = 96/272 (35%), Positives = 141/272 (51%), Gaps = 14/272 (5%)

Query: 3   LTVCTWNINSVRIRLDIVRAALERLRPDVLCLQETKCQDDKFPLNAIRDMGFPHIALNGQ 62
           + +  +NIN +R R   + A +E+ +PDV+ LQETK  DD+FPL  ++ +G+ H+  +GQ
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGY-HVHYHGQ 59

Query: 63  KGWHGVATFSKRPFAHIEKGEFCGKGDARHIAVTLDGAHALGKPLTIHNFYVPAGGDVPD 122
           KG +GVA  S++P   + KG    + DA+   +    A A G P+TI N Y P G     
Sbjct: 60  KGHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDH 119

Query: 123 PELNPKFAHKLAFLDEITSWPPLKPDAGNGDHAIVVGDLNIAPLETDVW----SHKQLLT 178
           P    KF  K  F  ++ +   L+    N    +V+GD+NI+P + D+     + K+ L 
Sbjct: 120 P---TKFPAKQRFYSDLQAL--LESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLK 174

Query: 179 V--VSHTPVEVERLGALQASGPWVDVMRRFVPPQEKLFTWWSYRSPDYTAN-DRGRRLDH 235
               S  P E E +  L+  G  VD  R   P     F+W+ YRS  +     RG R+D 
Sbjct: 175 TGKCSFLPEEREWMERLKGWG-LVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDL 233

Query: 236 VWASESLAPSATAMTVLKEARGWEKPSDHVPV 267
           + AS+ L P   A  V  E RG EKPSDH P+
Sbjct: 234 IMASQQLVPRIKAAGVDYELRGMEKPSDHAPI 265