Pairwise Alignments

Query, 726 a.a., Polyribonucleotide nucleotidyltransferase from Xanthobacter sp. DMC5

Subject, 576 a.a., 30S ribosomal protein S1 from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 5e-13
 Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 6/79 (7%)

Query: 625 GQIYEGTVVKVVDFGAFVNFFGSKDGLVHVSQMANERVAKPSDVVKEGDKVKVKLMGFD- 683
           GQ  +G V  + D+GAFV+  G  DGL+H++ MA +R+  PS++V  GD+V V+++ FD 
Sbjct: 210 GQQVKGIVKNLTDYGAFVDL-GGIDGLLHITDMAWKRIKHPSEIVNVGDEVDVRVLKFDR 268

Query: 684 ERGKTRLSMKVVDQTTGED 702
           ER +  L +K +    GED
Sbjct: 269 ERNRVSLGLKQM----GED 283



 Score = 48.1 bits (113), Expect = 1e-09
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 13/128 (10%)

Query: 590 INIEDDGTIKIASASGDSIKAAIN--------WIKSIASEPEVGQIYEGTVVKVVDFGAF 641
           +N+ D+  +++     +  + ++         W+   A  PE G   +  V  + D+G F
Sbjct: 253 VNVGDEVDVRVLKFDRERNRVSLGLKQMGEDPWVAITARYPE-GTRVQARVTNLTDYGCF 311

Query: 642 VNFFGSKDGLVHVSQM--ANERVAKPSDVVKEGDKVKVKLMGFD-ERGKTRLSMKVVDQT 698
                  +GLVHVS+M   N+ +  PS VV+ GD+V+V ++  D ER +  L +K     
Sbjct: 312 AELEEGVEGLVHVSEMDWTNKNI-HPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSN 370

Query: 699 TGEDLEAK 706
             ED   +
Sbjct: 371 PWEDFSGQ 378



 Score = 42.4 bits (98), Expect = 7e-08
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 625 GQIYEGTVVKVVDFGAFVNFFGSKDGLVHVSQMA-NERVAKPSDVVKEGDKVKVKLMGFD 683
           G    GT+  + DFG F+   G  DGLVH+S ++ NE   +     K+GD+++  ++  D
Sbjct: 382 GDKITGTIKSITDFGIFIGLDGGIDGLVHLSDISWNETGEEAVRRFKKGDELETVILSVD 441

Query: 684 -ERGKTRLSMKVVD 696
            ER +  L +K ++
Sbjct: 442 PERERISLGIKQLE 455