Pairwise Alignments

Query, 535 a.a., Heme-binding protein A from Xanthobacter sp. DMC5

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  123 bits (308), Expect = 2e-32
 Identities = 126/500 (25%), Positives = 216/500 (43%), Gaps = 42/500 (8%)

Query: 54  YQFTGYTLYDPLVAWEMNVADRPGKLVPGLATEWKVDPADPKKWLFTLRKGVKFHDGSDF 113
           Y  +   LY+ LV +++   +    ++PGLA +W+V   D K + F LRKGVK+HD  +F
Sbjct: 53  YDASSVPLYNRLVEFKIGTTE----VIPGLAEKWEVSE-DGKTYTFHLRKGVKWHDNKEF 107

Query: 114 ------NADAVVWNLDKVLDEKAPQFDKRQSAQVK----TRLPSIASW-RKVDDMTVE-I 161
                 NAD VV++ D+  + + P + K      +      LP + S  +KVDD TV+ +
Sbjct: 108 KPTRELNADDVVFSFDRQKNAQNP-YHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFV 166

Query: 162 TTKDVDSFFPYQMLWFLVSSPAQYE----KLGKDWDKFAQNPSGTGPFKQDKLVPRERLE 217
            T+    F     + F      +Y     K G   +K   NP GTGPF+  +     R+ 
Sbjct: 167 LTRPEAPFLADLAMDFASILSKEYADAMMKAGTP-EKLDLNPIGTGPFQLQQYQKDSRIR 225

Query: 218 LVRNPDYWDKSRLPKTDRMILIPMPEALTRTNALLAGQVDLIETPAPDAVPQLK---SAG 274
                 YW     P+ D ++    P+A  R   L   +  ++  P P  + ++K   S  
Sbjct: 226 YKAFDGYWGTK--PQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSIN 283

Query: 275 MKLVTNVTPHVWNYHLSVLPGSPWADVRLRKALNLAVDRDGVVELM-NGLAQPAKGQVDK 333
           +  +  +     +Y++      P  DV++R+AL  AV++D +++ +  G    AK  +  
Sbjct: 284 LMEMPGLNVGYLSYNVQK---KPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPP 340

Query: 334 TSPWFGKPTFDLKYDPEAAKKLVQEAGYSKEKPLKATFIIAAGGTGQMLSLPMNEFLQAS 393
           T   +     D  YDPE AK L++EAG  K   +   + +         +  M E +QA 
Sbjct: 341 TMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSID-LWAMPVQRPYNPNARRMAEMIQAD 399

Query: 394 FKEIGIDVEFKVVELEALYTAWRKGAKDPMNEGITSNNIAYVTSDPLYALIRFFDSRQVA 453
           + ++G+  +    E        + G    +  G T +N      DP       F S   +
Sbjct: 400 WAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDN-----GDPDNFFATLF-SCAAS 453

Query: 454 PVGVNWGYYSNPKVDALIDEAKRTFDTKKQDELLAQVHQQVVDDAVLVWVVHDVNPHALS 513
             G N+  +     + LI  A+ T D  K+ EL  Q    + D A  + + H      + 
Sbjct: 454 EQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVR 513

Query: 514 PKVKSFV---QAQHWFQDLT 530
            +VK +V     +H F++++
Sbjct: 514 KEVKGYVVDPLGKHHFENVS 533