Pairwise Alignments

Query, 350 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 348 a.a., ammonia monooxygenase from Magnetospirillum magneticum AMB-1

 Score =  168 bits (425), Expect = 2e-46
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 12/340 (3%)

Query: 6   SAAVTLGAGALGGLVFALLGLPAAWISGSLVACIGLALAGMRIDVPEWLRFLAFVVLGTS 65
           S AV LG G +GG +FA L LP  W+ G+L A    +L G+R ++P  +R +   VLG  
Sbjct: 6   SWAVALGLGGVGGSLFAALDLPLPWMLGALTAVTLASLGGLRPEIPASMRSVMIAVLGLM 65

Query: 66  MGTMLTPETFARAATWPVSMACLGASVLGTMAGG---TLFLTRVAGWSRESAFWASAPGA 122
           +G+  +P+  AR   W  S+  L    L T+A G   T +L R +  SR +AF+A+APG 
Sbjct: 66  LGSAFSPDLLARIGRWSDSLLVL---TLATLASGLLVTFYLRRTSKMSRVTAFFAAAPGG 122

Query: 123 FGTVVAMAADTNADLRQVAFAQTLRLFLLVAALPNVLAALGMTAGGVPPPPHVSTLGEI- 181
              +V        D R +A + +LR+ L+V  +P     +      VP    +  L ++ 
Sbjct: 123 INEMVLTGGAMGGDERTIALSHSLRILLIVFTVPFGYRLIA-HVHSVPMAESMGRLADLG 181

Query: 182 ----VVLFGVCTGAALLAARLKLPGGLILGALAGSAVLHATRLSTAVLPAELLIPAFVVL 237
               +V+ G     A LA   +LP  ++ G +  SA LH   L+    PAEL++ A +V 
Sbjct: 182 GMDALVMLGSAVAGAALARLARLPAWMLTGPMLSSAGLHLAGLTAFRPPAELVVLAQLVT 241

Query: 238 GGSVGVRFIGTSLSTIRAYVLASLGAFLVAVAISTLFALLAAWLTGDDLGKLVTAFAPGA 297
           G S+G RF G S S +      ++GA  + + +S   A L A       G L+ AF PG 
Sbjct: 242 GASIGCRFRGLSWSDMAGMARPAMGATAIMLVLSAGAAGLLAAGGHSSFGVLLLAFVPGG 301

Query: 298 LEAMTALGFAMGYDPAFMSAHHLFRFAGLSVALPVAARLM 337
           +  M  +  A+G D AF+S HH+ R   + +  P   +L+
Sbjct: 302 IAEMCLVALALGQDVAFVSTHHVVRVVMVIMLAPPIFKLL 341