Pairwise Alignments

Query, 400 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 352 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 96/369 (26%), Positives = 150/369 (40%), Gaps = 42/369 (11%)

Query: 40  LRDRLSKVIALAHLKL--ALRATIAGIVTYLLAEQFALPNGYWAVLTAVLVVQATL--GA 95
           LR  L       H KL  A+R +I  + T LL     LP+G WA +T ++V+      G 
Sbjct: 11  LRPLLDPYRRYRHAKLIHAVRVSIGLLATILLTTGINLPHGEWASVTMLVVIGGLQHHGN 70

Query: 96  SLSVAIDRALGTLAGGVVG---VAGAMLAGKSPLETLLVLSV--ALFIAAALAARSTSFK 150
               A++RA GTL G  VG   V      G+ PL T L++SV    F   A+     +  
Sbjct: 71  IGKKAVERAYGTLIGASVGLLLVVQEAYVGQ-PLLTYLLMSVVCGFFSYHAIGKGGYTAL 129

Query: 151 LAPVTVVIVMLAHPGDVAPWLSGLTRVAEIALGGVVGLLCAILILPERALGKMFPYCANA 210
           L+ +TV IV  A  GD  P   GL R  +I +G  + L  +   LP  A+       A+A
Sbjct: 130 LSAITVFIV--AGHGD-NPLSDGLWRTVDILIGIALALAFS-FALPLYAVYSWRYNLASA 185

Query: 211 LRLTAQLLD-LGRGGLLGQGIDPSIIDRLNGGARLALRAADLRLVEVRAEQAGRLTTQTD 269
           LR  AQ+   +  G  +       +++RLN        AA L+L  +    +  +     
Sbjct: 186 LRDCAQIYSRIINGESVTSDEHLKLLNRLN--------AAMLQLRSLMPSVSKEVRISMT 237

Query: 270 PAPVVRGARRLWHSAIILLRNA-DRPLDEPVAGLVSATLTAATTALSAQMSAIADRLDGQ 328
               ++   RL  S + +L N    P DE     +   L A    +  Q+  +       
Sbjct: 238 ELDAIQRHLRLCISTLEILGNTRPDPRDEQAMARMQGVLKAEHRQIRVQLVGM------- 290

Query: 329 PVADLATRADAASAAVAALEARVEELNAQGAFGAVGAETLTALFSAVSACVHMRENLEEL 388
                      A A  + +  R+E  +  G   A+ A   +AL       + + +N++ +
Sbjct: 291 -----------ARALKSGVTERLERQSHAGVEPALDAPVYSALDGYRLLTLQLAQNVDAM 339

Query: 389 AARLAEVQG 397
             RLA+  G
Sbjct: 340 RQRLAKSAG 348