Pairwise Alignments

Query, 563 a.a., (2S)-methylsuccinyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 387 a.a., isovaleryl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  219 bits (558), Expect = 2e-61
 Identities = 138/386 (35%), Positives = 207/386 (53%), Gaps = 12/386 (3%)

Query: 176 LDETTEAMRTEMHRFVEAEVAPHAHEWHLKNDYIPLEIISQLSEMGVFGLTIPEEFGGLG 235
           L ET + +R ++  FV AE+AP A +    N + P ++  +  +MG+ G+T+PEE+GG G
Sbjct: 10  LGETIDMLRDQVRTFVAAELAPRAAQIDHDNLF-PADMWRKFGDMGLLGITVPEEYGGAG 68

Query: 236 LPKEAMCVVTEELSRGYIGVG-SLGTRSEIAAELILAGGTDEQKGHFLPKIASGEILPTA 294
           L   A  V  EE+SRG   V  S G  S +    I   GT EQK  +LPK+ SGE +   
Sbjct: 69  LGYLAHVVSMEEISRGSASVALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISGEHIGAL 128

Query: 295 VFTEPNTGSDLASLRTRAVKEGDVYKVNGNKTWITHPVRADIMTLLVRTNPAEPGYKGLS 354
             +EPN GSD+ S++ RA K GD Y +NG+KTWIT+   A+   +  +T+  + G  G++
Sbjct: 129 AMSEPNAGSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTD-LDKGAHGIT 187

Query: 355 ILLAEKPRGSDENPFPAEGMTGGEIEVLGYRGMKEYEIGFDGFTVPAKNLLGGEEGQGFK 414
             + E+    D   F        + + LG RG    E+ FDG  VPA+N+LG   G G +
Sbjct: 188 AFIVER----DWKGFSRSN----KFDKLGMRGSNTCELFFDGVEVPAENILGQLNG-GVR 238

Query: 415 QLMTTFESARIQTAARAVGVAQAAMEVGLKYAEERIQFGKSLINFPRVADKIVMMAVETM 474
            LM+  +  R+  +    G+ Q+ M++ + Y  +R QFG+S+  F  +  KI  M  +  
Sbjct: 239 VLMSGLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLN 298

Query: 475 IARQITYFAARAKDEGRRTDLEAGMSKLLGARVAWAAADNALQIHGGNGFALEYPVSRIL 534
            +R   Y  A+A D G  T  +A    L  A  A   A  A+QI GGNG+  E+P  R+L
Sbjct: 299 ASRAYLYAVAQACDRGETTRKDAAGVILYTAERATQMALEAIQILGGNGYINEFPAGRLL 358

Query: 535 CDARILNIFEGAAEIQAQVIARRLLD 560
            DA++  I  G +EI+  +I R L +
Sbjct: 359 RDAKLYEIGAGTSEIRRMLIGRELFN 384