Pairwise Alignments

Query, 306 a.a., D-alanine--D-alanine ligase B from Xanthobacter sp. DMC5

Subject, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 2e-33
 Identities = 110/346 (31%), Positives = 163/346 (47%), Gaps = 60/346 (17%)

Query: 5   VAVLMGGWSSEREVSLNSGAACAAALEGAGYRVTPVDVGR-----------------DVA 47
           +A++ GG SSE  V+L S A   AAL   G+RV  V + R                 D +
Sbjct: 6   IALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGIDREGNWRYQGEPCQFPGAVDRS 65

Query: 48  EVLARLKP-------------------DVVFNVLHGAPGEDGTIQGILEILRIPYSHSGV 88
             L  ++P                   D++F  LHG  GEDGTIQG+  +  +P   SGV
Sbjct: 66  APLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGLPCVGSGV 125

Query: 89  LASALAMDKAQARIMLAAAGVPVAKGGLVSRAAAAKAHAME----RPYVLKPNTGGSSVG 144
           L SA+AMDK   + M+ +AG+ V    L   +       +E        +KP T GSS+G
Sbjct: 126 LGSAMAMDKDVTKRMVQSAGLVVVP-WLAMNSMRPWEELVECLGSSTLFVKPATSGSSIG 184

Query: 145 VFIVREDQEHPP--QELTREDWTLGENLLVEEFIAGLELTCAV-------MGDKVFDVIE 195
           V  V    E+        RED      +LVE  + G E+ C V       M   V ++I+
Sbjct: 185 VSRVSNALEYAAAFAIAARED----TKVLVEAAVCGREIECGVLELEEGLMASVVGEIIK 240

Query: 196 IESTQAFYDYESKYAPGGSRHI-LPARILPEIYQRVQMLSLTAHRALGCRGVSRSDFRFD 254
            E   A+YDY++KY       + +P+ + P+I  R+Q LS+ A R L  +G +R DF F 
Sbjct: 241 KEG-HAYYDYQAKYDSNSVTGLRVPSLLPPDIVARIQALSVQAFRCLELKGYARVDF-FL 298

Query: 255 PSKGDASGLVCLEVNTQPGMTRTSLVPELAAHAGISFGELVTWMVE 300
             +G+   ++  E+NT PG T  S+ P++   +G    +LV  +VE
Sbjct: 299 TEEGE---IILNEINTLPGFTSASMYPKMFECSGYPPPKLVGALVE 341