Pairwise Alignments

Query, 260 a.a., 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial from Xanthobacter sp. DMC5

Subject, 251 a.a., bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE from Erwinia tracheiphila SCR3

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 8/124 (6%)

Query: 49  RPARLLDLGCGGGHVSFTAAPFAG---EVVAYDLSEDMLGAVAAEARARGL-ANIATRQG 104
           R  R+LDL  G G ++   +   G   EVV  D++  ML     + R +G+  NI   Q 
Sbjct: 63  RGQRVLDLAGGTGDLTAKFSRLVGDTGEVVLADINSSMLKVGREKLRNKGIIGNINYVQA 122

Query: 105 VAERLPFADGSFDMVASRYSAHHWRDVPQALAEVRRVVKSGGQFVMMD----VIAPEWPV 160
            AE LPF D  FD +   +   +  D  +ALA + RV+K  G+ ++++    V+AP   +
Sbjct: 123 NAEALPFPDNHFDCITIAFGLRNVTDKDKALASMFRVLKPSGRLLVLEFSKPVLAPLSKI 182

Query: 161 ADTF 164
            D +
Sbjct: 183 YDAY 186