Pairwise Alignments

Query, 344 a.a., Farnesyl diphosphate synthase from Xanthobacter sp. DMC5

Subject, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 8e-63
 Identities = 134/289 (46%), Positives = 169/289 (58%), Gaps = 13/289 (4%)

Query: 62  DAALPGERLRP----ERLMGAMRHGALGGGKRLRPFLVIEGAALFGLTAEAAVTAATAIE 117
           DAAL    + P    ERL  AMR+  + GGKR+RP L        G  AE A  AA A+E
Sbjct: 14  DAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVE 73

Query: 118 CVHCYSLVHDDLPAMDDDDLRRGRPTVHKAYDEATAILAGDGLLTLAFDLLAGEDAHPD- 176
            +H YSLVHDDLPAMDDDDLRRG+PT HKA+DEA AILAGDGL +LAF  L      P  
Sbjct: 74  LIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPCLSPQI 133

Query: 177 PAVRIALVRALARAAGIGGMVGGQMLDLAAEGRFSGGTPLAHGEDAIRDLQAMKTGALLA 236
            ++R+A+V+ LA+AAG  GMVGGQ +DL + G+          + A+  +   KTGAL+ 
Sbjct: 134 DSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQ-------KLDQQALEFMHRHKTGALIE 186

Query: 237 VSAEAGALLGG-ADAGQRAALLAYGRALGAAFQIADDILDVEGTAEEVGKKVGKDAAAGK 295
            S   GAL    A+  Q  AL  Y +A+G AFQ+ DDILDVE     +GK+ G D A  K
Sbjct: 187 ASVRLGALASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDK 246

Query: 296 ATLVSRLGLPEARLLLDRLVAEAADALAPFGARGEILAEAARFVAARRS 344
            T  + LGL  A+     L  +A  AL  FG + E L   AR++  RR+
Sbjct: 247 PTYPALLGLEAAKAYAIELRDQALAALQGFGEKAEPLRALARYIVERRN 295