Pairwise Alignments

Query, 388 a.a., Inner membrane transport permease YhhJ from Xanthobacter sp. DMC5

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 6e-31
 Identities = 102/381 (26%), Positives = 157/381 (41%), Gaps = 11/381 (2%)

Query: 6   PSAKAPSPRRLPLGNVRWLVGKELLGLWRDRALLVLVVYAFTLAIVLQANGMKHDLNRAA 65
           P  +  S RRL    VR   GKELL   RD+  L   +      +V+   G+  D+   A
Sbjct: 528 PLRRGFSLRRLLAVAVR--EGKELL---RDKVRLAFALLGAVFMMVIFGYGISLDVENLA 582

Query: 66  VAVVDEDNSALSNAILDALLPPS-FQRPMPIAPQ-DVDPMMDAARYTFVLNFPPNFQADV 123
            AV D+D S  S A L+A      F    PI    ++   +  +     L  PP F  D+
Sbjct: 583 FAVHDQDQSPQSRAYLEAFRGSRYFAEQAPIRDSSELHQRLQRSEIKLALEIPPGFGRDL 642

Query: 124 LAGRSPEVQLLIDATALMQAGLGANDISAIFQTEVNRFVLRHSEGVA--SPVNLQIRAAF 181
            AGR P V   +D     +A    N + A+ Q  + +      +      PV L+ R  +
Sbjct: 643 YAGRQPVVAAWLDGGMPFRAETSRNYVEAVHQANLEQLAKASPQPQPRQDPVRLETRFRY 702

Query: 182 NQGLESSWFTGTMGLITNITMLSVLLAGAALIREREHGTLEHLLVLPVRPSEIMLAKVVA 241
           NQ + S    G   +   +  +  +L    ++RE+E G++ +    P+   E +L K + 
Sbjct: 703 NQDVVSVNAIGPGVMALILAFIPAMLTALGIVREKELGSITNFYATPLTRLEFLLGKQMP 762

Query: 242 NGAVILVATLVSLVAVLKWVLGVSIAGSIPLFLAGAALYLFFTASLGIFLGTLAGSMPQF 301
             AV LV  L  LVA+ +W+  V + GS+     G   YL  T SLG+ +     +    
Sbjct: 763 YLAVSLV-NLALLVAMNRWLFAVPLKGSVLALACGGVAYLLATTSLGLLISAFTRTQIAA 821

Query: 302 GL-LFFLVVLPMNMLSGGFTPLESMPQWLQVTMQASPSTQFVAFAQAILYRGAGLETVWP 360
            L    +  LP    SG   P  S+     V  Q  P+  F+  A     +  GL  +WP
Sbjct: 822 ILGTMIITSLPTIQFSGLIVPRSSLDGAAAVMGQLFPAGYFLDIAVGTFTKALGLRELWP 881

Query: 361 RFAATFGIGALFFAVALARFR 381
           +        A F  ++LA  +
Sbjct: 882 QCLILLSFFAAFTGLSLAMLK 902