Pairwise Alignments

Query, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 27/262 (10%)

Query: 2   KRSLAILAVIVALAAAG-GAGAWY--LAHRSRALPPGFAEGNGRIEATEVDVATKAAGRL 58
           KR   +L +++ L  AG G  AWY  +     +    +  GN       V++    AG +
Sbjct: 19  KRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGN------VVEITPLVAGTV 72

Query: 59  LDVLAEEGDFIKQGQVIAHIDVSDLEAALRTADAQAAQA-RQSR------DTAFHVVEQR 111
             + A++GD +  GQV+   D +D E AL++A+A+ A++ RQ R      D+    +E R
Sbjct: 73  TSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETR 132

Query: 112 KGELDLATKELERQETLVAKGFATEQKVDQYRTTKLTAAAALAAAQSSLAASESA----- 166
           + EL  A ++  R++ L   G    +++   R     A AA+ +A+  L+ S +      
Sbjct: 133 QAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVDDTV 192

Query: 167 ------IRAAEAEVDRLKRLVADGTLIAPKSGRVIYRLAEPGEVLGAGGKVLTFIDLSDV 220
                 + AA A++ +     A  TL+AP +G V  R  + G+ L  G   +  I L  V
Sbjct: 193 VSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPGTATMAVIPLDQV 252

Query: 221 YMTIFLPAADAGRIGVGTPARL 242
           ++           + +G P  +
Sbjct: 253 WIDANFKETQLREMRIGQPVEI 274