Pairwise Alignments

Query, 418 a.a., Prophage integrase IntA from Xanthobacter sp. DMC5

Subject, 423 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  110 bits (276), Expect = 6e-29
 Identities = 109/436 (25%), Positives = 185/436 (42%), Gaps = 42/436 (9%)

Query: 5   MNRLTARTVASLKDPGRYPDGGNLYLQIGPTGSKAWLFMFKRDGKRREMGLGSLNDVTLA 64
           +N    R +     P +  D   LYL + PTGS+ W F +   GK   + LG+   ++L+
Sbjct: 3   LNDTKIRNLKPPVTPIKLSDSHGLYLHVKPTGSRLWYFRYYFFGKETRIALGAYPLISLS 62

Query: 65  AARLKADEARRIVADGGDPFAVREAALAVRKEVEAAPTFGAFADALITKLAHGFRNEKHV 124
            AR K DE R+++A   +P   R A  A R   +   T      AL    ++   +E H 
Sbjct: 63  EARQKRDELRKLLAQNINPTQQRAAEKAARSPAKNFKTV-----ALSWHKSNRTWSENHA 117

Query: 125 AQWQMTLGPTYCTAIRDMKIADITA---VDILKVLEPIWQDKNETASRLRGRIERVLDAA 181
           A+   ++       I  + I ++     +D+LK +E   +   E A+R R  +  ++  A
Sbjct: 118 ARLLASMNNHIFPIIGHLPITELKTRHFIDLLKGIEK--KGLLEVAARTRQHMCNIMRHA 175

Query: 182 KVEGLRSGENPAQWKGNLQHRLSKRQKLQRGHHAALPYAEVPAFIVAL---RARQAIAAR 238
             + L    NPA    NL   ++   K    H+ AL    +P  + ++   +  + +   
Sbjct: 176 VHQELIE-HNPA---ANLDGIIAPPVK---RHYPALLLERLPELLASIEDYKQGRELTRL 228

Query: 239 ALEFAILTAARSGEVLGATWAEIDFKAAVWTVPATR------------MKAGREHRVPLS 286
           A+   +    RS E+  A W+EIDF+  +WT+PATR             K    H VPLS
Sbjct: 229 AVSLTLHLFIRSSELRFARWSEIDFRNKIWTIPATREAIPGVRYSGRGAKMRTPHIVPLS 288

Query: 287 DAAVSVLREAEPHRRGDDPETAFVFPG-LRPMRPLSTMAMEMLLRRQ----KQVFTVHGF 341
             ++++L++     R        +FPG   P +P+    +   LR      K     HGF
Sbjct: 289 RQSITILKQI----REISGHQELIFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGF 344

Query: 342 RSSFRDWAAEETSFPREIAEAALAHVVGDATERAY-RRGDALEKRRDMMTAWATFCTTEP 400
           R+       E   + ++  E  ++H   ++   AY  + + L+ R+ MM  W+ +  T  
Sbjct: 345 RAMACSALMESGLWAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYLDTNR 404

Query: 401 AEQKGEGDEASEAKAA 416
            E       A + K A
Sbjct: 405 EEYVAPYIYAQQHKTA 420