Pairwise Alignments

Query, 416 a.a., Colistin resistance protein EmrA from Xanthobacter sp. DMC5

Subject, 367 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

 Score =  240 bits (613), Expect = 4e-68
 Identities = 143/348 (41%), Positives = 204/348 (58%), Gaps = 18/348 (5%)

Query: 60  SRKPFIFGTVLAVLAVAGGWYGLNWWQVGR-FQVSTDDAYVAADTSVIAAKVGGYVKSVD 118
           +RK    G+VLAV  +AG    +  W  G   + ST+DAYV AD +V+A KV G++K V 
Sbjct: 18  NRKTLFIGSVLAVAVLAGI---VGPWMFGSDHRQSTNDAYVTADYTVVAPKVAGFIKQVL 74

Query: 119 VDTNQWVKAGDVIARIDDGDYRLALQSAENKIATQEATLSRFDQQETAARATVDQMKAQL 178
           V+ NQ V AG ++A ID  DY+ AL +A+ ++   +A       Q   ARAT+++  A +
Sbjct: 75  VEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQA-------QSADARATLERQDALI 127

Query: 179 ASAEADQRRAQAEF-------DRQDKLARSDFASRSTLDNARADKDKTAASVEAAKAAIA 231
           A AEA  + AQAE        +R  +LA     +      AR+  D+  A +  A+AA  
Sbjct: 128 AQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQARARLANAQAARV 187

Query: 232 SAEAQVVVLAAQRTEASHVLDELKTARDQAKRDLDFTVVRAPIDGVVGNRAAQVGQLVQT 291
           +A  QV +L AQ   A   L   +   ++A+ DL +T + AP+DG+VG RA +VG  V  
Sbjct: 188 AARKQVDILTAQVASADGQLKRAEAGLEKAQLDLSYTRITAPVDGMVGERALRVGAYVNP 247

Query: 292 GTRLVAVVPLESVYVDANFKETQLGRLKPGQSVNVYVDAYPDHDFAGKVVSVSPASGSVF 351
           G RL++VVPL+  YV  NF+ETQL  ++PGQ V + VD +      G V S++PA+G  F
Sbjct: 248 GARLLSVVPLQQAYVVGNFQETQLTHVQPGQPVRISVDTFSGETLQGHVQSIAPATGVTF 307

Query: 352 SLLPPENATGNFTKIVQRIPVRIAIDPNVLAKHELRPGMSVTATVDTK 399
           + + P+NATGNFTK+VQRIPV+I +D        LR GMSV AT+DT+
Sbjct: 308 AAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTRLRVGMSVEATIDTR 355