Pairwise Alignments

Query, 416 a.a., Colistin resistance protein EmrA from Xanthobacter sp. DMC5

Subject, 387 a.a., multidrug efflux MFS transporter periplasmic adaptor subunit EmrK from Escherichia coli ECRC62

 Score =  196 bits (498), Expect = 1e-54
 Identities = 124/363 (34%), Positives = 196/363 (53%), Gaps = 14/363 (3%)

Query: 57  KARSRKPFIFGTVLAVLAVAGGWYGLNWWQVGRFQVSTDDAYVAADTSVIAAKVGGYVKS 116
           K  S +   F  +  VL +A       W       +STDDAYV  +   I+A+V G V  
Sbjct: 8   KKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTV 67

Query: 117 VDVDTNQWVKAGDVIARIDDGDYRLALQSAENKIATQEATLSRFDQQETAARATVDQMKA 176
           V+     +V+ GD++  +D  D  +AL  A+N +A      ++   Q+        Q  A
Sbjct: 68  VNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDK-------QYSA 120

Query: 177 QLASAEADQRRAQAEFDRQDKLARSDFASRSTLDNARADKDKTAASVEAAKAAIASAEAQ 236
           ++ASA    +++  +++R+  LA+    S+ TL++    KD   +S  A  AAI + +A 
Sbjct: 121 EVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHT---KDTLISSKAALNAAIQAYKAN 177

Query: 237 VVVLAAQRTEASHVLDELKTARDQAKRDLDFTVVRAPIDGVVGNRAAQVGQLVQTGTRLV 296
             ++          + E   A  +A   L  T +++P+ G +  R+ QVG+ V  G  L+
Sbjct: 178 KALIMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLM 237

Query: 297 AVVPLESVYVDANFKETQLGRLKPGQSVNVYVDAYPDHD-FAGKVVSVSPASGSVFSLLP 355
           AVVP   ++V+ANFKETQL  ++ GQSVN+  D Y ++  F G+V  ++  +G+ FSLLP
Sbjct: 238 AVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLP 297

Query: 356 PENATGNFTKIVQRIPVRIAIDPNVLAKHELRPGMSVTATVDTKS---APATSTAAAPTS 412
            +NATGN+ KIVQR+PV +++D   L +H LR G+S+TAT+DTK+   A     A+  TS
Sbjct: 298 AQNATGNWIKIVQRVPVEVSLDLKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTS 357

Query: 413 SPA 415
            PA
Sbjct: 358 MPA 360